From 85b3c984282930660ccf58073b248bb2282da88a Mon Sep 17 00:00:00 2001 From: Mark Keller <7525285+keller-mark@users.noreply.github.com> Date: Wed, 18 Dec 2024 12:16:14 -0500 Subject: [PATCH] Fix spatialdata configuration --- docs/notebooks/spatial_data.ipynb | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/docs/notebooks/spatial_data.ipynb b/docs/notebooks/spatial_data.ipynb index 60550f2..d516f96 100644 --- a/docs/notebooks/spatial_data.ipynb +++ b/docs/notebooks/spatial_data.ipynb @@ -94,8 +94,8 @@ " sdata_path=spatialdata_filepath,\n", " # The following paths are relative to the root of the SpatialData zarr store on-disk.\n", " image_path=\"images/CytAssist_FFPE_Human_Breast_Cancer_full_image\",\n", - " table_path=\"table/table\",\n", - " obs_feature_matrix_path=\"table/table/X\",\n", + " table_path=\"tables/table\",\n", + " obs_feature_matrix_path=\"tables/table/X\",\n", " obs_spots_path=\"shapes/CytAssist_FFPE_Human_Breast_Cancer\",\n", " region=\"CytAssist_FFPE_Human_Breast_Cancer\",\n", " coordinate_system=\"global\",\n", @@ -163,7 +163,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.9.0" + "version": "3.10.14" } }, "nbformat": 4,