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feat: add a flag for incidental findings (#1121) #1466

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merged 1 commit into from
Mar 25, 2024

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@stolpeo stolpeo commented Mar 22, 2024

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@stolpeo stolpeo linked an issue Mar 22, 2024 that may be closed by this pull request
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github-actions bot commented Mar 22, 2024

deps-report 🔍

Commit scanned: 936063e
ℹ️ Python version 3.10 is used by your project but the latest version is 3.12.

Vulnerable dependencies

2 dependencies have vulnerabilities 😱
Dependency Advisory Versions impacted
pyopenssl (transitive) CVE-2023-6129 affects PyOpenSSL versions starting from 22.0.0 due to a vulnerability in the POLY1305 MAC algorithm on PowerPC CPUs. This issue could lead to state corruption in applications, causing inaccurate outcomes or service disruptions. Attackers need specific conditions to exploit this flaw, including the ability to manipulate the algorithm's use and reliance on certain system registers by the application. >=22.0.0
sqlalchemy Sqlalchemy 2.0.0b1 avoids leaking cleartext passwords to the open for careless uses of str(engine.URL()) in logs and prints. sqlalchemy/sqlalchemy#8563 <2.0.0b1

Outdated dependencies

53 outdated dependencies found (including 17 outdated major versions)😢
Dependency Installed version Latest version
argon2-cffi (transitive) 21.3.0 23.1.0
billiard (transitive) 3.6.4.0 4.2.0
coverage (dev,transitive) 6.5.0 7.4.4
crispy-bootstrap4 (transitive) 2022.1 2024.1
django 3.2.25 5.0.3
faker (dev,transitive) 23.3.0 24.3.0
flake8 (dev) 6.1.0 7.0.0
lxml 4.9.4 5.1.0
mistune (transitive) 2.0.5 3.0.2
packaging (transitive) 23.2 24.0
protobuf 3.20.3 5.26.0
setuptools (transitive) 67.6.1 69.2.0
sphinx (transitive) 6.2.1 7.2.6
sphinx-rtd-theme (transitive) 1.2.2 2.0.0
sqlalchemy 1.4.51 2.0.29
unidecode (transitive) 0.4.21 1.3.8
xmlschema (transitive) 2.5.1 3.1.0
Dependency Installed version Latest version
aiobotocore (transitive) 2.12.0 2.12.1
botocore (transitive) 1.34.51 1.34.69
celery (transitive) 5.2.7 5.3.6
click-didyoumean (transitive) 0.3.0 0.3.1
django-autocomplete-light (transitive) 3.9.4 3.11.0
django-crispy-forms (transitive) 2.0 2.1
django-db-file-storage (transitive) 0.5.5 0.5.6.1
django-environ (transitive) 0.10.0 0.11.2
django-iconify (transitive) 0.1.1 0.4
django-model-utils (transitive) 4.3.1 4.4.0
django-plugins-bihealth 0.4.0 0.5.2
django-postgres-copy 2.3.7 2.7.4
django-pydantic-field 0.3.3 0.3.4
djangorestframework (transitive) 3.14.0 3.15.1
docutils (transitive) 0.18.1 0.20.1
drf-keyed-list-bihealth 0.1.1 0.2.1
drf-spectacular-sidecar (transitive) 2024.2.1 2024.3.4
elementpath (transitive) 4.3.0 4.4.0
fsspec (transitive) 2024.2.0 2024.3.1
ipython (dev,transitive) 8.22.1 8.22.2
markdown (transitive) 3.4.1 3.6
pydantic-core (transitive) 2.16.3 2.17.0
pyflakes (dev,transitive) 3.1.0 3.2.0
pyopenssl (transitive) 24.0.0 24.1.0
python-dateutil 2.9.0 2.9.0.post0
redis 5.0.2 5.0.3
referencing (transitive) 0.33.0 0.34.0
requests-http-signature 0.2.0 0.7.1
s3fs 2024.2.0 2024.3.1
sentry-sdk 1.40.6 1.43.0
traitlets (dev,transitive) 5.14.1 5.14.2
trio (dev,transitive) 0.24.0 0.25.0
universal-pathlib 0.2.1 0.2.2
urllib3 (transitive) 2.0.7 2.2.1
versioneer (transitive) 0.28 0.29
wheel (transitive) 0.40.0 0.43.0

Logs

@stolpeo stolpeo force-pushed the 1121-add-a-flag-for-incidental-findings branch from d434b27 to 0f6f3c3 Compare March 22, 2024 16:36
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codecov bot commented Mar 22, 2024

Codecov Report

Attention: Patch coverage is 25.00000% with 3 lines in your changes are missing coverage. Please review.

Project coverage is 38%. Comparing base (9d3d83b) to head (936063e).
Report is 13 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff            @@
##            main   #1466      +/-   ##
========================================
- Coverage     70%     38%     -32%     
========================================
  Files        383     137     -246     
  Lines      24945    7496   -17449     
  Branches    1634    1637       +3     
========================================
- Hits       17480    2897   -14583     
+ Misses      7465    4599    -2866     
Files Coverage Δ
...eapp/src/components/CaseDetail/CardAnnotations.vue 88% <ø> (ø)
svs/vueapp/src/stores/strucvarFlags/store.ts 13% <ø> (ø)
...eapp/src/varfish/components/FlagsCard/constants.ts 0% <ø> (ø)
...eapp/src/components/FilterForm/FlagsPane.fields.js 100% <ø> (ø)
...nts/vueapp/src/components/FilterForm/FlagsPane.vue 100% <100%> (ø)
variants/vueapp/src/stores/variantFlags.ts 14% <ø> (ø)
...ases/vueapp/src/components/CaseDetail/FlagIcon.vue 88% <0%> (-12%) ⬇️
...app/src/varfish/components/FlagsCard/FlagsCard.vue 0% <0%> (ø)

... and 246 files with indirect coverage changes

@stolpeo stolpeo force-pushed the 1121-add-a-flag-for-incidental-findings branch from 0f6f3c3 to 3af5c31 Compare March 25, 2024 09:05
@stolpeo stolpeo enabled auto-merge (squash) March 25, 2024 09:06
@stolpeo stolpeo force-pushed the 1121-add-a-flag-for-incidental-findings branch from 3af5c31 to 936063e Compare March 25, 2024 10:21
@stolpeo stolpeo merged commit 04bd4f6 into main Mar 25, 2024
15 of 16 checks passed
@stolpeo stolpeo deleted the 1121-add-a-flag-for-incidental-findings branch March 25, 2024 10:31
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Add a flag for incidental findings
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