diff --git a/download-data.sh b/download-data.sh index 7f95af7..bdd3239 100644 --- a/download-data.sh +++ b/download-data.sh @@ -479,17 +479,17 @@ ln -sr $(ls $DATA_DIR/download/worker/genes-regions-grch38-*/refseq_genes.bin | log_info " - grch3{7,8}/features" mkdir -p $DATA_DIR/worker/grch3{7,8}/features -rm -f $DATA_DIR/worker/grch3?/features/{masked_repeat.bin,masked_seqdup.bin} +rm -f $DATA_DIR/worker/grch3?/features/{masked_repeat.bin,masked_segdup.bin} ln -sr $(ls $DATA_DIR/download/worker/masked-repeat-grch37-*/masked-repeat.bin | tr ' ' '\n' | tail -n 1) \ $DATA_DIR/worker/grch37/features/masked_repeat.bin ln -sr $(ls $DATA_DIR/download/worker/masked-segdup-grch37-*/masked-segdup.bin | tr ' ' '\n' | tail -n 1) \ - $DATA_DIR/worker/grch37/features/masked_seqdup.bin + $DATA_DIR/worker/grch37/features/masked_segdup.bin ln -sr $(ls $DATA_DIR/download/worker/masked-repeat-grch38-*/masked-repeat.bin | tr ' ' '\n' | tail -n 1) \ $DATA_DIR/worker/grch38/features/masked_repeat.bin ln -sr $(ls $DATA_DIR/download/worker/masked-segdup-grch38-*/masked-segdup.bin | tr ' ' '\n' | tail -n 1) \ - $DATA_DIR/worker/grch38/features/masked_seqdup.bin + $DATA_DIR/worker/grch38/features/masked_segdup.bin log_info "- tracks"