diff --git a/CVO/cvo.owl b/CVO/cvo.owl
index 0f8e94f..0f96a4a 100644
--- a/CVO/cvo.owl
+++ b/CVO/cvo.owl
@@ -16,7 +16,7 @@
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#">
-
+
en
Chris mungall
Erica Marcos
@@ -62,7 +62,7 @@
OWL-DL
Vaccine Ontology Cancer Vaccine View
- 2024-11-23
+ 2024-12-29
@@ -6122,6 +6122,21 @@ https://sourceforge.net/p/obi/obi-terms/738/
+
+
+
+
+ An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population.
+
+ quality
+ PATO:0000169
+
+
+ viability
+
+
+
+
@@ -6654,6 +6669,38 @@ https://sourceforge.net/p/obi/obi-terms/738/
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ A vaccine that uses RNA(s) derived from a pathogen organism.
+ Using RNA may eliminate the problem of having to tailor a vaccine for each individual patient with their specific immunity. The advantage of RNA is that it can be used for all immunity types and can be taken from a single cell. DNA vaccines need to produce RNA which then prompts the manufacture of proteins. However, RNA vaccine eliminates the step from DNA to RNA.
+ Oliver He
+ mRNA vaccine
+ https://en.wikipedia.org/wiki/RNA_vaccine
+ vaccine
+ RNA vaccine
+
+
+
+
@@ -6696,6 +6743,19 @@ https://sourceforge.net/p/obi/obi-terms/738/
+
+
+
+
+ an organismal quality of a whole organism vaccine where the whole organism is inactivated/killed and lacks the capability of replication.
+ Oliver He
+ vaccine organism killed
+ quality
+ vaccine organism inactivated
+
+
+
+
@@ -6723,6 +6783,37 @@ https://sourceforge.net/p/obi/obi-terms/738/
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ A whole organism vaccine that uses an inativated pathogen organism as its component.
+ Oliver He
+ inactivated organism vaccine
+ killed vaccine
+ vaccine
+ inactivated vaccine
+
+
+
+
@@ -7045,7 +7136,7 @@ https://sourceforge.net/p/obi/obi-terms/738/
- A process that results in an adaptive immune response to one or more antigens.
+ Process that results in an adaptive immune response to one or more antigens.
Allen Xiang
Anna Maria Masci
Barry Smith
@@ -7080,7 +7171,7 @@ https://sourceforge.net/p/obi/obi-terms/738/
-
+
@@ -7140,7 +7231,7 @@ https://sourceforge.net/p/obi/obi-terms/738/
- disorder prevention is a processual entity that prevents a disorder that is the physical basis of a disease.
+ Process that prevents a disorder that is the physical basis of a disease.
Allen Xiang
Oliver He
process
@@ -7153,7 +7244,7 @@ https://sourceforge.net/p/obi/obi-terms/738/
- disorder treatment is a processual entity that leads to treat a disorder that is the physical basis of a disease.
+ Process that leads to treat a disorder that is the physical basis of a disease.
Allen Xiang
Oliver He
process
@@ -7262,6 +7353,35 @@ https://sourceforge.net/p/obi/obi-terms/738/
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ A vaccine containing a toxoid, used to protect against toxins produced by certain bacteria. A toxoid (also called inactivated toxin) is a processed toxin that has been treated by chemical means, heat, or irradiation and is no longer capable of causing disease.
+ Oliver He
+ vaccine
+ toxoid vaccine
+
+
+
+
@@ -7623,6 +7743,60 @@ https://sourceforge.net/p/obi/obi-terms/738/
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ a viral vaccine that is inactivated
+ killed viral vaccine
+ vaccine
+ inactivated viral vaccine
+
+
+
+
+
+
+
+
+ A vaccine role that indicates the vaccine being a RNA vaccine.
+ Oliver He
+ role
+ RNA vaccine role
+
+
+
+
+
+
+
+
+ A vaccine role that indicates the vaccine being a toxoid vaccine.
+ Oliver He
+ role
+ toxoid vaccine role
+
+
+
+
@@ -7777,6 +7951,49 @@ https://sourceforge.net/p/obi/obi-terms/738/
+
+
+
+
+ vaccine viability is a viability of a vaccine organism.
+ Allen Xiang
+ Oliver He
+ quality
+ vaccine organism viability
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ a bacterial vaccine that uses inactivated bacterial organism.
+ Oliver He
+ vaccine
+ inactivated bacterial vaccine
+
+
+
+
@@ -8173,6 +8390,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -8181,6 +8399,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -8208,6 +8432,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -8215,6 +8440,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -8241,6 +8472,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -8250,6 +8482,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -8295,6 +8533,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -8302,6 +8541,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -8363,12 +8608,19 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
+
@@ -10002,6 +10254,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -10010,6 +10263,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -10113,6 +10372,8 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
@@ -10120,6 +10381,18 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
+
+
+
+
+
+
@@ -10427,10 +10700,57 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+ A vaccine role that inheres in a vaccine using virus-like particles (VLPs), multiprotein structures that mimic the organization and conformation of authentic native viruses but lack the viral genome, potentially yielding safer and cheaper vaccines.
+ Anthony Huffman
+ Oliver He
+ virus like particle vaccine role
+ https://pubmed.ncbi.nlm.nih.gov/20923267/
+ role
+ virus-like particle vaccine role
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ A vaccine that uses virus-like particles (VLPs), multiprotein structures that mimic the organization and conformation of authentic native viruses but lack the viral genome, potentially yielding safer and cheaper vaccines.
+ Anthony Huffman
+ Oliver He
+ virus like particle vaccine
+ https://pubmed.ncbi.nlm.nih.gov/20923267/
+ vaccine
+ virus-like particle vaccine
+
+
+
+
-
+
@@ -10442,7 +10762,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
-
+
@@ -12377,6 +12697,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -12392,6 +12713,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -12425,6 +12752,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -12440,6 +12768,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -13856,19 +14190,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
-
-
-
-
-
-
-
@@ -15965,6 +16292,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -15980,6 +16308,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -16021,6 +16355,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -16030,6 +16365,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -16540,6 +16881,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -16548,6 +16890,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -18330,7 +18678,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
-
+
@@ -18342,7 +18690,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
-
+
@@ -18383,6 +18731,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -18398,6 +18747,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -19023,6 +19378,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -19038,6 +19394,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -19332,6 +19694,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -19347,6 +19710,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -20599,6 +20968,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -20614,6 +20984,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -22874,6 +23250,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -22888,6 +23265,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -24187,6 +24570,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -24202,6 +24586,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -24558,6 +24948,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -24572,6 +24963,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -24604,6 +25001,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -24618,6 +25016,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -25381,6 +25785,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -25396,6 +25801,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -25523,6 +25934,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -25538,6 +25950,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -25832,6 +26250,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -25847,6 +26266,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -26383,12 +26808,19 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
+
@@ -26478,6 +26910,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -26486,6 +26919,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -26805,12 +27244,19 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
+
@@ -26892,6 +27338,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -26907,6 +27354,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -27957,6 +28410,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -27970,6 +28424,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -28050,6 +28510,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -28065,6 +28526,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -28239,6 +28706,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -28254,6 +28722,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -28287,6 +28761,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -28302,6 +28777,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -29881,6 +30362,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -29889,6 +30371,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -30128,6 +30616,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -30142,6 +30631,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -30258,6 +30753,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -30265,6 +30761,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -30335,6 +30837,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -30342,6 +30845,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -30939,6 +31448,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -30949,6 +31459,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -31257,6 +31773,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -31265,6 +31782,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -32002,12 +32525,19 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
+
@@ -32151,6 +32681,7 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
@@ -32158,6 +32689,12 @@ However, running the reasoner takes time. As a way to reducing the time, I have
+
+
+
+
+
+
@@ -34146,6 +34683,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -34154,6 +34692,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -34857,6 +35401,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -34865,6 +35410,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -35595,6 +36146,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -35602,6 +36154,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -35900,6 +36458,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -35907,6 +36466,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -35940,6 +36505,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -35947,6 +36513,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -36171,6 +36743,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -36179,6 +36752,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -36204,6 +36783,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -36212,6 +36792,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -36578,6 +37164,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -36585,6 +37172,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -38177,6 +38770,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -38184,6 +38778,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
@@ -38520,6 +39120,7 @@ Immunization Route: Intramuscular injection (i.m.)
+
@@ -38533,6 +39134,12 @@ Immunization Route: Intramuscular injection (i.m.)
+
+
+
+
+
+
diff --git a/CVX-VO/cvx-vo.owl b/CVX-VO/cvx-vo.owl
index 66dc933..657453b 100644
--- a/CVX-VO/cvx-vo.owl
+++ b/CVX-VO/cvx-vo.owl
@@ -17,7 +17,7 @@
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#">
-
+
en
Jie Zheng
Yongqun "Oliver" He (YH)
@@ -26,7 +26,7 @@
OWL-DL
Vaccine Ontology CVX code View
- 2024-11-23
+ 2024-12-29
@@ -7952,6 +7952,7 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
@@ -7988,6 +7989,12 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
+
+
+
+
+
@@ -8406,6 +8413,7 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
@@ -8436,6 +8444,12 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
+
+
+
+
+
@@ -8622,6 +8636,7 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
@@ -8664,6 +8679,12 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
+
+
+
+
+
@@ -8825,6 +8846,7 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
@@ -8845,6 +8867,12 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
+
+
+
+
+
@@ -8926,6 +8954,38 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ A vaccine that is composed of a plasmid vaccine vector (a circular double stranded DNA molecule) containing the whole of parts of genes encoding one or more vaccine antigen proteins.
+ Oliver He
+ genetic vaccine
+ naked DNA vaccine
+ nucleic acid vaccine
+ vaccine
+ DNA vaccine
+
+
+
+
@@ -9803,6 +9863,7 @@ http://biotech.about.com/b/2008/09/03/gardasil-safety-of-genetically-engineered-
+
@@ -9845,6 +9906,12 @@ http://biotech.about.com/b/2008/09/03/gardasil-safety-of-genetically-engineered-
+
+
+
+
+
+
@@ -10997,11 +11064,8 @@ influenzae type b (Haemophilus b, Ross strain) that is covalently bound to an ou
-
-
-
@@ -11082,6 +11146,12 @@ influenzae type b (Haemophilus b, Ross strain) that is covalently bound to an ou
+
+
+
+
+
+
@@ -11976,6 +12046,7 @@ influenzae type b (Haemophilus b, Ross strain) that is covalently bound to an ou
+
@@ -11984,6 +12055,12 @@ influenzae type b (Haemophilus b, Ross strain) that is covalently bound to an ou
+
+
+
+
+
+
@@ -12357,7 +12434,6 @@ influenzae type b (Haemophilus b, Ross strain) that is covalently bound to an ou
-
@@ -12498,7 +12574,6 @@ influenzae type b (Haemophilus b, Ross strain) that is covalently bound to an ou
-
@@ -13323,6 +13398,13 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
+
+
+
+
+
+
+
a Varicella-zoster virus vaccine that is live attenuated.
Oliver He
vaccine
@@ -13669,7 +13751,14 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
+
+
+
+
+
+
+
@@ -13699,7 +13788,7 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
- A process that results in an adaptive immune response to one or more antigens.
+ Process that results in an adaptive immune response to one or more antigens.
Allen Xiang
Anna Maria Masci
Barry Smith
@@ -13734,7 +13823,7 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
-
+
@@ -13794,7 +13883,7 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
- disorder prevention is a processual entity that prevents a disorder that is the physical basis of a disease.
+ Process that prevents a disorder that is the physical basis of a disease.
Allen Xiang
Oliver He
process
@@ -13807,7 +13896,7 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
- disorder treatment is a processual entity that leads to treat a disorder that is the physical basis of a disease.
+ Process that leads to treat a disorder that is the physical basis of a disease.
Allen Xiang
Oliver He
process
@@ -13848,7 +13937,14 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
+
+
+
+
+
+
+
a diphtheria vaccine that uses diphtheria toxoid
Oliver He
vaccine
@@ -14342,6 +14438,18 @@ http://sourceforge.net/tracker/?func=detail&aid=2873643&group_id=76834&a
+
+
+
+
+ A vaccine role that indicates the vaccine being a DNA vaccine.
+ Oliver He
+ role
+ DNA vaccine role
+
+
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+
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a subunit vaccine that uses polysaccharide as protective antigen
Oliver He
vaccine
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@@ -19885,6 +20025,12 @@ Aluminum hydroxide. 0.35 mg (as aluminum)
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vaccine
Bordetella pertussis filamentous hemagglutinin vaccine, inactivated
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vaccine
Streptococcus pneumoniae capsular antigen diphtheria CRM197 protein conjugate vaccine
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A clostridium tetani vaccine that consists of formaldehyde inactivated tetanospasmin (aka tetanus toxoid).
Hector Guzman-Orozco
Oliver He
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Oliver He
Philip Huang
Rohit Goru
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Oliver He
Philip Huang
Rohit Goru
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Oliver He
Philip Huang
Rohit Goru
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Philip Huang
vaccine
COVID-19 DNA vaccine
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Philip Huang
vaccine
COVID-19 live, attenuated vaccine
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Philip Huang
vaccine
COVID-19 virus-like particle vaccine
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@@ -30045,6 +30526,7 @@ administered prior to exposure or within two weeks after exposure.
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@@ -30931,7 +31489,14 @@ administered prior to exposure or within two weeks after exposure.
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