Command line: /public/home/xzh/.conda/envs/mategenome/bin/spades.py	-1	/public/home/xzh/rare_earth/A40/QC/R1_qc.fq.gz	-2	/public/home/xzh/rare_earth/A40/QC/R2_qc.fq.gz	-o	/public/home/xzh/rare_earth/A40/assembly	--meta	

System information:
  SPAdes version: 4.0.0
  Python version: 3.13.1
  OS: Linux-3.10.0-1127.el7.x86_64-x86_64-with-glibc2.17

Output dir: /public/home/xzh/rare_earth/A40/assembly
Mode: read error correction and assembling
Debug mode is turned OFF

Dataset parameters:
  Metagenomic mode
  Reads:
    Library number: 1, library type: paired-end
      orientation: fr
      left reads: ['/public/home/xzh/rare_earth/A40/QC/R1_qc.fq.gz']
      right reads: ['/public/home/xzh/rare_earth/A40/QC/R2_qc.fq.gz']
      interlaced reads: not specified
      single reads: not specified
      merged reads: not specified
Read error correction parameters:
  Iterations: 1
  PHRED offset will be auto-detected
  Corrected reads will be compressed
Assembly parameters:
  k: [21, 33, 55]
  Repeat resolution is enabled
  Mismatch careful mode is turned OFF
  MismatchCorrector will be SKIPPED
  Coverage cutoff is turned OFF
  Assembly graph output will use GFA v1.2 format
Other parameters:
  Dir for temp files: /public/home/xzh/rare_earth/A40/assembly/tmp
  Threads: 16
  Memory limit (in Gb): 250