Jan-13 22:28:06.127 [main] DEBUG nextflow.cli.Launcher - $> nextflow run FastOMA.nf -profile standard --input_folder ./in_folder --output_folder ./out_folder --omamer_db /home/yankh/yeast_converge/genomes/LUCA.h5 --report Jan-13 22:28:06.365 [main] DEBUG nextflow.cli.CmdRun - N E X T F L O W ~ version 24.10.3 Jan-13 22:28:06.443 [main] DEBUG nextflow.plugin.PluginsFacade - Setting up plugin manager > mode=prod; embedded=false; plugins-dir=/home/yankh/.nextflow/plugins; core-plugins: nf-amazon@2.9.2,nf-azure@1.10.2,nf-cloudcache@0.4.2,nf-codecommit@0.2.2,nf-console@1.1.4,nf-google@1.15.3,nf-tower@1.9.3,nf-wave@1.7.4 Jan-13 22:28:06.523 [main] INFO o.pf4j.DefaultPluginStatusProvider - Enabled plugins: [] Jan-13 22:28:06.526 [main] INFO o.pf4j.DefaultPluginStatusProvider - Disabled plugins: [] Jan-13 22:28:06.537 [main] INFO org.pf4j.DefaultPluginManager - PF4J version 3.12.0 in 'deployment' mode Jan-13 22:28:06.578 [main] INFO org.pf4j.AbstractPluginManager - No plugins Jan-13 22:28:06.662 [main] DEBUG nextflow.config.ConfigBuilder - Found config local: /home/yankh/extra/OMA/nextflow.config Jan-13 22:28:06.674 [main] DEBUG nextflow.config.ConfigBuilder - Parsing config file: /home/yankh/extra/OMA/nextflow.config Jan-13 22:28:06.798 [main] DEBUG n.secret.LocalSecretsProvider - Secrets store: /home/yankh/.nextflow/secrets/store.json Jan-13 22:28:06.814 [main] DEBUG nextflow.secret.SecretsLoader - Discovered secrets providers: [nextflow.secret.LocalSecretsProvider@4a325eb9] - activable => nextflow.secret.LocalSecretsProvider@4a325eb9 Jan-13 22:28:06.858 [main] DEBUG nextflow.config.ConfigBuilder - Applying config profile: `standard` Jan-13 22:28:09.349 [main] DEBUG nextflow.cli.CmdRun - Applied DSL=2 by global default Jan-13 22:28:09.384 [main] DEBUG nextflow.cli.CmdRun - Launching `FastOMA.nf` [tiny_venter] DSL2 - revision: 48e581689f Jan-13 22:28:09.388 [main] DEBUG nextflow.plugin.PluginsFacade - Plugins default=[] Jan-13 22:28:09.389 [main] DEBUG nextflow.plugin.PluginsFacade - Plugins resolved requirement=[] Jan-13 22:28:09.512 [main] DEBUG nextflow.Session - Session UUID: 7212d967-c750-4fb6-a6c2-5cda7ee9bfd4 Jan-13 22:28:09.513 [main] DEBUG nextflow.Session - Run name: tiny_venter Jan-13 22:28:09.514 [main] DEBUG nextflow.Session - Executor pool size: 112 Jan-13 22:28:09.533 [main] DEBUG nextflow.file.FilePorter - File porter settings maxRetries=3; maxTransfers=50; pollTimeout=null Jan-13 22:28:09.560 [main] DEBUG nextflow.util.ThreadPoolBuilder - Creating thread pool 'FileTransfer' minSize=10; maxSize=336; workQueue=LinkedBlockingQueue[10000]; allowCoreThreadTimeout=false Jan-13 22:28:09.645 [main] DEBUG nextflow.cli.CmdRun - Version: 24.10.3 build 5933 Created: 16-12-2024 15:34 UTC (23:34 CDT) System: Linux 3.10.0-1160.95.1.el7.x86_64 Runtime: Groovy 4.0.23 on OpenJDK 64-Bit Server VM 17.0.13-internal+0-adhoc..src Encoding: UTF-8 (UTF-8) Process: 13772@T640 [10.102.33.46] CPUs: 112 - Mem: 503.3 GB (7.9 GB) - Swap: 4 GB (318.1 MB) Jan-13 22:28:09.716 [main] DEBUG nextflow.Session - Work-dir: /home/yankh/extra/OMA/work [ext2/ext3] Jan-13 22:28:09.718 [main] DEBUG nextflow.Session - Script base path does not exist or is not a directory: /home/yankh/extra/OMA/bin Jan-13 22:28:09.737 [main] DEBUG nextflow.executor.ExecutorFactory - Extension executors providers=[] Jan-13 22:28:09.756 [main] DEBUG nextflow.Session - Observer factory: DefaultObserverFactory Jan-13 22:28:09.889 [main] DEBUG nextflow.cache.CacheFactory - Using Nextflow cache factory: nextflow.cache.DefaultCacheFactory Jan-13 22:28:09.909 [main] DEBUG nextflow.util.CustomThreadPool - Creating default thread pool > poolSize: 113; maxThreads: 1000 Jan-13 22:28:10.029 [main] DEBUG nextflow.Session - Session start Jan-13 22:28:10.037 [main] DEBUG nextflow.trace.TraceFileObserver - Workflow started -- trace file: /home/yankh/extra/OMA/out_folder/stats/trace_2025-01-13_22-28-08.txt Jan-13 22:28:11.899 [main] DEBUG nextflow.script.ScriptRunner - > Launching execution Jan-13 22:28:11.934 [main] INFO nextflow.Nextflow - =========================================== FastOMA -- PIPELINE =========================================== Project : /home/yankh/extra/OMA Git info: null - null [null] Cmd line: nextflow run FastOMA.nf -profile standard --input_folder ./in_folder --output_folder ./out_folder --omamer_db /home/yankh/yeast_converge/genomes/LUCA.h5 --report Manifest's pipeline version: 0.3.5 Parameters: input_folder ./in_folder proteome folder ./in_folder/proteome species_tree ./in_folder/species_tree.nwk splice_folder ./in_folder/splice omamer_db /home/yankh/yeast_converge/genomes/LUCA.h5 hogmap_in ./in_folder/hogmap_in fasta_header_id_transformer noop filter_method col-row-threshold filter_gap_ratio_row 0.3 filter_gap_ratio_col 0.5 nr_repr_per_hog 5 min_sequence_length 40 debug_enabled false report true force_pairwise_ortholog_generation false Jan-13 22:28:12.332 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_single` matches labels `process_single` for process with name check_input Jan-13 22:28:12.353 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:12.354 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:12.367 [main] DEBUG nextflow.executor.Executor - [warm up] executor > local Jan-13 22:28:12.384 [main] DEBUG n.processor.LocalPollingMonitor - Creating local task monitor for executor 'local' > cpus=112; memory=503.3 GB; capacity=112; pollInterval=100ms; dumpInterval=5m Jan-13 22:28:12.389 [main] DEBUG n.processor.TaskPollingMonitor - >>> barrier register (monitor: local) Jan-13 22:28:12.636 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_single` matches labels `process_single` for process with name omamer_run Jan-13 22:28:12.641 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:12.642 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:12.732 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_single` matches labels `process_single` for process with name infer_roothogs Jan-13 22:28:12.739 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:12.740 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:12.765 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:12.766 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:12.836 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:12.837 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:12.848 [main] DEBUG nextflow.processor.TaskProcessor - Creating *combiner* operator for each param(s) at index(es): [0] Jan-13 22:28:12.903 [main] DEBUG nextflow.script.ProcessConfig - Config settings `withLabel:process_single` matches labels `process_single` for process with name hog_rest Jan-13 22:28:12.913 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:12.914 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:12.920 [main] DEBUG nextflow.processor.TaskProcessor - Creating *combiner* operator for each param(s) at index(es): [0] Jan-13 22:28:12.994 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:12.995 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:13.036 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:13.038 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:13.072 [main] DEBUG nextflow.executor.ExecutorFactory - << taskConfig executor: local Jan-13 22:28:13.073 [main] DEBUG nextflow.executor.ExecutorFactory - >> processorType: 'local' Jan-13 22:28:13.089 [main] DEBUG nextflow.Session - Workflow process names [dsl2]: infer_roothogs, omamer_run, hog_rest, batch_roothogs, extract_pairwise_ortholog_relations, collect_subhogs, fastoma_report, hog_big, check_input Jan-13 22:28:13.094 [main] DEBUG nextflow.Session - Igniting dataflow network (19) Jan-13 22:28:13.109 [PathVisitor-2] DEBUG nextflow.file.PathVisitor - files for syntax: glob; folder: ./in_folder/proteome/; pattern: *; options: [type:any, checkIfExists:true] Jan-13 22:28:13.109 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > check_input Jan-13 22:28:13.111 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > omamer_run Jan-13 22:28:13.129 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > infer_roothogs Jan-13 22:28:13.130 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > batch_roothogs Jan-13 22:28:13.131 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > hog_big Jan-13 22:28:13.132 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > hog_big Jan-13 22:28:13.132 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > hog_rest Jan-13 22:28:13.133 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > hog_rest Jan-13 22:28:13.134 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > collect_subhogs Jan-13 22:28:13.135 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > extract_pairwise_ortholog_relations Jan-13 22:28:13.136 [main] DEBUG nextflow.processor.TaskProcessor - Starting process > fastoma_report Jan-13 22:28:13.137 [main] DEBUG nextflow.script.ScriptRunner - Parsed script files: Script_5c7d86ba1b08228c: /home/yankh/extra/OMA/FastOMA.nf Jan-13 22:28:13.137 [main] DEBUG nextflow.script.ScriptRunner - > Awaiting termination Jan-13 22:28:13.137 [main] DEBUG nextflow.Session - Session await Jan-13 22:28:13.378 [Actor Thread 46] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:13.381 [Actor Thread 46] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/splice -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/splice Jan-13 22:28:13.587 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:13.592 [Task submitter] INFO nextflow.Session - [92/df5df9] Submitted process > check_input (1) Jan-13 22:28:43.748 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 1; name: check_input (1); status: COMPLETED; exit: 0; error: -; workDir: /home/yankh/extra/OMA/work/92/df5df944168749e0f3383525448161] Jan-13 22:28:43.750 [Task monitor] DEBUG nextflow.util.ThreadPoolBuilder - Creating thread pool 'TaskFinalizer' minSize=10; maxSize=336; workQueue=LinkedBlockingQueue[10000]; allowCoreThreadTimeout=false Jan-13 22:28:43.797 [Actor Thread 81] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 74] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 68] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 83] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 70] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.797 [Actor Thread 64] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 80] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 72] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 78] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.796 [Actor Thread 66] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.798 [Actor Thread 87] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.801 [Actor Thread 88] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.804 [Actor Thread 76] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.810 [Actor Thread 92] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.810 [Actor Thread 97] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.810 [Actor Thread 86] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.810 [Actor Thread 91] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.810 [Actor Thread 89] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.810 [Actor Thread 85] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.810 [Actor Thread 99] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.811 [Actor Thread 95] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.811 [Actor Thread 94] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.820 [Actor Thread 101] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.825 [Actor Thread 103] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.827 [Actor Thread 105] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.826 [Actor Thread 109] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.826 [TaskFinalizer-1] DEBUG nextflow.util.ThreadPoolBuilder - Creating thread pool 'PublishDir' minSize=10; maxSize=336; workQueue=LinkedBlockingQueue[10000]; allowCoreThreadTimeout=false Jan-13 22:28:43.828 [Actor Thread 108] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.828 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:43.828 [Actor Thread 107] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.829 [Actor Thread 66] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.829 [Task submitter] INFO nextflow.Session - [12/8ca676] Submitted process > omamer_run (B.juncea_BJ260_B.fa) Jan-13 22:28:43.829 [Actor Thread 111] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.829 [Actor Thread 112] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.832 [Actor Thread 64] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.832 [Actor Thread 110] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.833 [Actor Thread 106] DEBUG nextflow.util.HashBuilder - Unable to get file attributes file: /home/yankh/extra/OMA/in_folder/hogmap_in -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/in_folder/hogmap_in Jan-13 22:28:43.959 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:43.964 [Task submitter] INFO nextflow.Session - [81/dd9ac7] Submitted process > omamer_run (A.halleri.fa) Jan-13 22:28:43.991 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:43.993 [Task submitter] INFO nextflow.Session - [7b/9e698c] Submitted process > omamer_run (C.hirsuta.fa) Jan-13 22:28:44.005 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.007 [Task submitter] INFO nextflow.Session - [64/c268a8] Submitted process > omamer_run (B.juncea_BJ189_B.fa) Jan-13 22:28:44.022 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.024 [Task submitter] INFO nextflow.Session - [cd/0e076f] Submitted process > omamer_run (A.lyrata.fa) Jan-13 22:28:44.036 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.038 [Task submitter] INFO nextflow.Session - [57/f03e8f] Submitted process > omamer_run (B.nigra.fa) Jan-13 22:28:44.053 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.055 [Task submitter] INFO nextflow.Session - [68/cb517e] Submitted process > omamer_run (B.oleracea_JZS.fa) Jan-13 22:28:44.069 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.079 [Task submitter] INFO nextflow.Session - [40/11de47] Submitted process > omamer_run (B.carinata_B.fa) Jan-13 22:28:44.093 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.112 [Task submitter] INFO nextflow.Session - [f6/c61b64] Submitted process > omamer_run (B.juncea_BJ200_A.fa) Jan-13 22:28:44.121 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.167 [Task submitter] INFO nextflow.Session - [fb/006f74] Submitted process > omamer_run (E.salsugineum.fa) Jan-13 22:28:44.201 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.246 [Task submitter] INFO nextflow.Session - [bb/776294] Submitted process > omamer_run (A.arabicum.fa) Jan-13 22:28:44.265 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.284 [Task submitter] INFO nextflow.Session - [1c/0bdb71] Submitted process > omamer_run (A.rusticana_S1_h1.fa) Jan-13 22:28:44.300 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.347 [Task submitter] INFO nextflow.Session - [e0/d1f776] Submitted process > omamer_run (B.juncea_BJ203_B.fa) Jan-13 22:28:44.358 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.383 [Task submitter] INFO nextflow.Session - [14/efefb5] Submitted process > omamer_run (S.irio.fa) Jan-13 22:28:44.393 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.398 [Task submitter] INFO nextflow.Session - [2a/ead6fb] Submitted process > omamer_run (B.juncea_BJ260_A.fa) Jan-13 22:28:44.411 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.430 [Task submitter] INFO nextflow.Session - [01/db5776] Submitted process > omamer_run (B.juncea_BJ200_B.fa) Jan-13 22:28:44.439 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.440 [Task submitter] INFO nextflow.Session - [7a/556731] Submitted process > omamer_run (E.yunnanense.fa) Jan-13 22:28:44.449 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.491 [Task submitter] INFO nextflow.Session - [0f/8174c9] Submitted process > omamer_run (B.rapa.fa) Jan-13 22:28:44.512 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.518 [Task submitter] INFO nextflow.Session - [37/6f5a23] Submitted process > omamer_run (T.arvense.fa) Jan-13 22:28:44.527 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.540 [Task submitter] INFO nextflow.Session - [27/04f4e8] Submitted process > omamer_run (B.carinata_C.fa) Jan-13 22:28:44.549 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.555 [Task submitter] INFO nextflow.Session - [0f/0d0e48] Submitted process > omamer_run (B.juncea_BJ189_A.fa) Jan-13 22:28:44.575 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.601 [Task submitter] INFO nextflow.Session - [fc/282cb3] Submitted process > omamer_run (E.japonica_B.fa) Jan-13 22:28:44.611 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.620 [Task submitter] INFO nextflow.Session - [bd/e7106f] Submitted process > omamer_run (B.juncea_BJ203_A.fa) Jan-13 22:28:44.631 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.647 [Task submitter] INFO nextflow.Session - [fa/1d959b] Submitted process > omamer_run (B.vulgaris.fa) Jan-13 22:28:44.655 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.671 [Task submitter] INFO nextflow.Session - [3b/ea76a0] Submitted process > omamer_run (B.napus_A.fa) Jan-13 22:28:44.681 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.691 [Task submitter] INFO nextflow.Session - [3c/5a007a] Submitted process > omamer_run (E.japonica_A.fa) Jan-13 22:28:44.728 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.772 [Task submitter] INFO nextflow.Session - [65/02152d] Submitted process > omamer_run (I.indigotica.fa) Jan-13 22:28:44.788 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.806 [Task submitter] INFO nextflow.Session - [ce/2115c8] Submitted process > omamer_run (A.thaliana.fa) Jan-13 22:28:44.842 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.875 [Task submitter] INFO nextflow.Session - [8a/79b3aa] Submitted process > omamer_run (L.alabamica.fa) Jan-13 22:28:44.886 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.904 [Task submitter] INFO nextflow.Session - [71/8f0923] Submitted process > omamer_run (R.sativus_RS00.fa) Jan-13 22:28:44.915 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.950 [Task submitter] INFO nextflow.Session - [38/40f0bd] Submitted process > omamer_run (B.juncea_BJ197_B.fa) Jan-13 22:28:44.966 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:44.975 [Task submitter] INFO nextflow.Session - [43/0346ad] Submitted process > omamer_run (A.rusticana_S2_h1.fa) Jan-13 22:28:44.996 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:45.015 [Task submitter] INFO nextflow.Session - [b0/f1088f] Submitted process > omamer_run (B.napus_C.fa) Jan-13 22:28:45.083 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:45.097 [Task submitter] INFO nextflow.Session - [fe/9d4838] Submitted process > omamer_run (B.juncea_BJ197_A.fa) Jan-13 22:28:45.924 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 7; name: omamer_run (B.juncea_BJ203_B.fa); status: COMPLETED; exit: 255; error: -; workDir: /home/yankh/extra/OMA/work/e0/d1f7766f46d1170440e6c19295c05d] Jan-13 22:28:45.955 [TaskFinalizer-2] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (B.juncea_BJ203_B.fa); work-dir=/home/yankh/extra/OMA/work/e0/d1f7766f46d1170440e6c19295c05d error [nextflow.exception.ProcessFailedException]: Process `omamer_run (B.juncea_BJ203_B.fa)` terminated with an error exit status (255) Jan-13 22:28:46.014 [TaskFinalizer-2] INFO nextflow.processor.TaskProcessor - [e0/d1f776] NOTE: Process `omamer_run (B.juncea_BJ203_B.fa)` terminated with an error exit status (255) -- Execution is retried (1) Jan-13 22:28:46.039 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:46.052 [Task submitter] INFO nextflow.Session - [13/43d76d] Re-submitted process > omamer_run (B.juncea_BJ203_B.fa) Jan-13 22:28:46.730 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 24; name: omamer_run (B.vulgaris.fa); status: COMPLETED; exit: 255; error: -; workDir: /home/yankh/extra/OMA/work/fa/1d959bccddfdfb25823ba91f10e0ec] Jan-13 22:28:46.736 [TaskFinalizer-3] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (B.vulgaris.fa); work-dir=/home/yankh/extra/OMA/work/fa/1d959bccddfdfb25823ba91f10e0ec error [nextflow.exception.ProcessFailedException]: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (255) Jan-13 22:28:46.740 [TaskFinalizer-3] INFO nextflow.processor.TaskProcessor - [fa/1d959b] NOTE: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (255) -- Execution is retried (1) Jan-13 22:28:46.767 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:46.768 [Task submitter] INFO nextflow.Session - [e6/78b4cf] Re-submitted process > omamer_run (B.vulgaris.fa) Jan-13 22:28:46.821 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 20; name: omamer_run (B.juncea_BJ200_B.fa); status: COMPLETED; exit: 255; error: -; workDir: /home/yankh/extra/OMA/work/01/db57766936dbed7e67ad495e8e445a] Jan-13 22:28:46.827 [TaskFinalizer-4] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (B.juncea_BJ200_B.fa); work-dir=/home/yankh/extra/OMA/work/01/db57766936dbed7e67ad495e8e445a error [nextflow.exception.ProcessFailedException]: Process `omamer_run (B.juncea_BJ200_B.fa)` terminated with an error exit status (255) Jan-13 22:28:46.829 [TaskFinalizer-4] INFO nextflow.processor.TaskProcessor - [01/db5776] NOTE: Process `omamer_run (B.juncea_BJ200_B.fa)` terminated with an error exit status (255) -- Execution is retried (1) Jan-13 22:28:46.870 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:46.873 [Task submitter] INFO nextflow.Session - [9e/b79268] Re-submitted process > omamer_run (B.juncea_BJ200_B.fa) Jan-13 22:28:46.946 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 28; name: omamer_run (E.japonica_A.fa); status: COMPLETED; exit: 255; error: -; workDir: /home/yankh/extra/OMA/work/3c/5a007a233287f1fadf4e8354720c8f] Jan-13 22:28:46.954 [TaskFinalizer-5] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (E.japonica_A.fa); work-dir=/home/yankh/extra/OMA/work/3c/5a007a233287f1fadf4e8354720c8f error [nextflow.exception.ProcessFailedException]: Process `omamer_run (E.japonica_A.fa)` terminated with an error exit status (255) Jan-13 22:28:46.965 [TaskFinalizer-5] INFO nextflow.processor.TaskProcessor - [3c/5a007a] NOTE: Process `omamer_run (E.japonica_A.fa)` terminated with an error exit status (255) -- Execution is retried (1) Jan-13 22:28:46.999 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:47.000 [Task submitter] INFO nextflow.Session - [42/266f5a] Re-submitted process > omamer_run (E.japonica_A.fa) Jan-13 22:28:47.074 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 32; name: omamer_run (I.indigotica.fa); status: COMPLETED; exit: 139; error: -; workDir: /home/yankh/extra/OMA/work/65/02152d24aa136bc65322bab90a7887] Jan-13 22:28:47.080 [TaskFinalizer-6] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (I.indigotica.fa); work-dir=/home/yankh/extra/OMA/work/65/02152d24aa136bc65322bab90a7887 error [nextflow.exception.ProcessFailedException]: Process `omamer_run (I.indigotica.fa)` terminated with an error exit status (139) Jan-13 22:28:47.088 [TaskFinalizer-6] INFO nextflow.processor.TaskProcessor - [65/02152d] NOTE: Process `omamer_run (I.indigotica.fa)` terminated with an error exit status (139) -- Execution is retried (1) Jan-13 22:28:47.120 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:47.122 [Task submitter] INFO nextflow.Session - [86/cc36f8] Re-submitted process > omamer_run (I.indigotica.fa) Jan-13 22:28:47.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 37; name: omamer_run (B.vulgaris.fa); status: COMPLETED; exit: 139; error: -; workDir: /home/yankh/extra/OMA/work/e6/78b4cf062bddf6ed16ea8af3e2306f] Jan-13 22:28:47.391 [TaskFinalizer-7] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (B.vulgaris.fa); work-dir=/home/yankh/extra/OMA/work/e6/78b4cf062bddf6ed16ea8af3e2306f error [nextflow.exception.ProcessFailedException]: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (139) Jan-13 22:28:47.394 [TaskFinalizer-7] INFO nextflow.processor.TaskProcessor - [e6/78b4cf] NOTE: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (139) -- Execution is retried (2) Jan-13 22:28:47.424 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:47.426 [Task submitter] INFO nextflow.Session - [18/51c30f] Re-submitted process > omamer_run (B.vulgaris.fa) Jan-13 22:28:50.704 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 41; name: omamer_run (B.vulgaris.fa); status: COMPLETED; exit: 139; error: -; workDir: /home/yankh/extra/OMA/work/18/51c30f7354da95eee46364a3c4c05f] Jan-13 22:28:50.753 [TaskFinalizer-8] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (B.vulgaris.fa); work-dir=/home/yankh/extra/OMA/work/18/51c30f7354da95eee46364a3c4c05f error [nextflow.exception.ProcessFailedException]: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (139) Jan-13 22:28:50.774 [TaskFinalizer-8] INFO nextflow.processor.TaskProcessor - [18/51c30f] NOTE: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (139) -- Execution is retried (3) Jan-13 22:28:50.817 [Task submitter] DEBUG n.executor.local.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run Jan-13 22:28:50.819 [Task submitter] INFO nextflow.Session - [7e/bcd928] Re-submitted process > omamer_run (B.vulgaris.fa) Jan-13 22:29:06.233 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 42; name: omamer_run (B.vulgaris.fa); status: COMPLETED; exit: 254; error: -; workDir: /home/yankh/extra/OMA/work/7e/bcd9288ed8d1c4aa96795a7bb0a0f2] Jan-13 22:29:06.241 [TaskFinalizer-9] DEBUG nextflow.processor.TaskProcessor - Handling unexpected condition for task: name=omamer_run (B.vulgaris.fa); work-dir=/home/yankh/extra/OMA/work/7e/bcd9288ed8d1c4aa96795a7bb0a0f2 error [nextflow.exception.ProcessFailedException]: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (254) Jan-13 22:29:06.277 [TaskFinalizer-9] DEBUG nextflow.processor.TaskRun - Unable to dump output of process 'omamer_run (B.vulgaris.fa)' -- Cause: java.nio.file.NoSuchFileException: /home/yankh/extra/OMA/work/7e/bcd9288ed8d1c4aa96795a7bb0a0f2/.command.out Jan-13 22:29:06.294 [TaskFinalizer-9] ERROR nextflow.processor.TaskProcessor - Error executing process > 'omamer_run (B.vulgaris.fa)' Caused by: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (254) Command executed: if [ -f hogmap_in/B.vulgaris.fa.hogmap ] ; then cp hogmap_in/B.vulgaris.fa.hogmap B.vulgaris.fa.hogmap else omamer search -n 10 --db LUCA.h5 --query B.vulgaris.fa --out B.vulgaris.fa.hogmap fi Command exit status: 254 Command output: (empty) Command error: .command.run: fork: retry: No child processes .command.run: fork: retry: No child processes .command.run: fork: retry: No child processes .command.run: fork: retry: No child processes .command.run: fork: Resource temporarily unavailable Work dir: /home/yankh/extra/OMA/work/7e/bcd9288ed8d1c4aa96795a7bb0a0f2 Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh` Jan-13 22:29:06.462 [TaskFinalizer-9] DEBUG nextflow.Session - Session aborted -- Cause: Process `omamer_run (B.vulgaris.fa)` terminated with an error exit status (254) Jan-13 22:29:06.536 [TaskFinalizer-9] DEBUG nextflow.Session - The following nodes are still active: [process] infer_roothogs status=ACTIVE port 0: (value) OPEN ; channel: hogmaps port 1: (value) bound ; channel: proteome_folder port 2: (queue) OPEN ; channel: splice_folder port 3: (cntrl) - ; channel: $ [process] batch_roothogs status=ACTIVE port 0: (queue) OPEN ; channel: rhogs port 1: (cntrl) - ; channel: $ [process] hog_big status=ACTIVE port 0: (value) OPEN ; channel: __$eachinparam<0> port 1: (queue) OPEN ; channel: species_tree port 2: (value) OPEN ; channel: nr_species port 3: (cntrl) - ; channel: $ [process] hog_rest status=ACTIVE port 0: (value) OPEN ; channel: __$eachinparam<0> port 1: (queue) OPEN ; channel: species_tree port 2: (cntrl) - ; channel: $ [process] collect_subhogs status=ACTIVE port 0: (value) OPEN ; channel: pickles port 1: (queue) OPEN ; channel: gene_id_dic_xml.pickle port 2: (queue) OPEN ; channel: rhogs port 3: (queue) OPEN ; channel: species_tree port 4: (value) bound ; channel: id_transform port 5: (cntrl) - ; channel: $ [process] extract_pairwise_ortholog_relations status=ACTIVE port 0: (queue) OPEN ; channel: orthoxml port 1: (value) OPEN ; channel: nr_species port 2: (cntrl) - ; channel: $ [process] fastoma_report status=ACTIVE port 0: (value) bound ; channel: notebook port 1: (queue) OPEN ; channel: orthoxml port 2: (value) bound ; channel: proteome_folder port 3: (queue) OPEN ; channel: species_tree_checked port 4: (cntrl) - ; channel: $ Jan-13 22:29:06.998 [Task monitor] DEBUG n.processor.TaskPollingMonitor - <<< barrier arrives (monitor: local) - terminating tasks monitor poll loop Jan-13 22:29:07.020 [TaskFinalizer-9] DEBUG nextflow.Session - Thread[pool-2-thread-12,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 21,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 54,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 16983),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-5,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17163),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18243),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 111,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-21,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 58,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PublishDir-1,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-46,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 25,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 11,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17329),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 74,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 14,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 36,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 80,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 12,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-5,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 84,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-27,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-44,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 100,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-6,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PathVisitor-2,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 18,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 47,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 67,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-42,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 33,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 57,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17754),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 81,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PathVisitor-3,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 64,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 99,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-38,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-30,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 55,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-13,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-24,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 32,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 105,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-22,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-49,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 107,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18530),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 48,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 24,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 101,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-6,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 44,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-7,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-15,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 69,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PathVisitor-1,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper,10,system] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-39,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 86,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-18,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-1,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 19532),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 20090),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[AnsiLogObserver,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) app//nextflow.trace.AnsiLogObserver.render0(AnsiLogObserver.groovy:185) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) java.base@17.0.13-internal/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) java.base@17.0.13-internal/java.lang.reflect.Method.invoke(Method.java:569) app//org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:343) app//groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:328) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1333) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethodClosure(MetaClassImpl.java:1017) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1207) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1007) app//groovy.lang.Closure.call(Closure.java:433) app//groovy.lang.Closure.call(Closure.java:412) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17743),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-35,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 70,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PathVisitor-7,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-23,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-19,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 43,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-7,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 9,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 16864),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 72,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 87,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 77,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper,10,system] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Common-Cleaner,8,InnocuousThreadGroup] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:155) java.base@17.0.13-internal/jdk.internal.ref.CleanerImpl.run(CleanerImpl.java:140) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) java.base@17.0.13-internal/jdk.internal.misc.InnocuousThread.run(InnocuousThread.java:162) Thread[process reaper (pid 19277),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 19686),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 90,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 51,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 88,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17533),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 19748),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-36,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 29,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 66,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-4,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 23873),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 59,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 96,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-14,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 27,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 4,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 56,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18072),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 102,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 98,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 97,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 5,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 16,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 46,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 52,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Thread-1,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.awaitNanos(AbstractQueuedSynchronizer.java:1679) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingDeque.pollFirst(LinkedBlockingDeque.java:515) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingDeque.poll(LinkedBlockingDeque.java:677) app//nextflow.util.SimpleAgent.run(SimpleAgent.groovy:89) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) java.base@17.0.13-internal/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) java.base@17.0.13-internal/java.lang.reflect.Method.invoke(Method.java:569) app//org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:343) app//groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:328) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1333) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethodClosure(MetaClassImpl.java:1017) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1207) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1007) app//groovy.lang.Closure.call(Closure.java:433) app//groovy.lang.Closure.call(Closure.java:412) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 15,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 85,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-40,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-8,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 94,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 103,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 41,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 78,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 92,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-43,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 8,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PathVisitor-4,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Signal Dispatcher,9,system] Thread[Actor Thread 75,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 42,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 6,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 1,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 60,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 62,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-29,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 22,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 3,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 34,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 26,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 16775),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Notification Thread,9,system] Thread[Actor Thread 82,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-17,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 7,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-1,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 89,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-34,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 10,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 76,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-8,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 39,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 65,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 113,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-20,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-45,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-2,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-32,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 30,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-48,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-16,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17191),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 24209),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-37,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-26,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 25853),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Task monitor,5,] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1764) app//nextflow.processor.TaskPollingMonitor$_await_closure5.doCall(TaskPollingMonitor.groovy:529) app//nextflow.processor.TaskPollingMonitor$_await_closure5.call(TaskPollingMonitor.groovy) app//nextflow.extension.Bolts.withLock(Bolts.groovy:337) app//nextflow.extension.Bolts.withLock(Bolts.groovy) app//nextflow.processor.TaskPollingMonitor.await(TaskPollingMonitor.groovy:528) app//nextflow.processor.TaskPollingMonitor.pollLoop(TaskPollingMonitor.groovy:453) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) java.base@17.0.13-internal/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) java.base@17.0.13-internal/java.lang.reflect.Method.invoke(Method.java:569) app//org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:343) app//groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:328) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1333) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1007) app//org.codehaus.groovy.runtime.InvokerHelper.invokePogoMethod(InvokerHelper.java:645) app//org.codehaus.groovy.runtime.InvokerHelper.invokeMethod(InvokerHelper.java:628) app//org.codehaus.groovy.runtime.InvokerHelper.invokeMethodSafe(InvokerHelper.java:82) app//nextflow.processor.TaskPollingMonitor$_start_closure2.doCall(TaskPollingMonitor.groovy:318) app//nextflow.processor.TaskPollingMonitor$_start_closure2.call(TaskPollingMonitor.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 53,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 19336),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-33,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 106,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 31,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-41,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-47,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-9,5,main] java.base@17.0.13-internal/java.lang.Thread.dumpThreads(Native Method) java.base@17.0.13-internal/java.lang.Thread.getAllStackTraces(Thread.java:1671) app//nextflow.util.SysHelper.dumpThreads(SysHelper.groovy:188) app//nextflow.Session.abort(Session.groovy:800) app//nextflow.Session.fault(Session.groovy:766) app//nextflow.processor.TaskPollingMonitor.finalizeTask(TaskPollingMonitor.groovy:695) app//nextflow.processor.TaskPollingMonitor.safeFinalizeTask(TaskPollingMonitor.groovy:678) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) java.base@17.0.13-internal/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) java.base@17.0.13-internal/java.lang.reflect.Method.invoke(Method.java:569) app//org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:343) app//groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:328) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1333) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1007) app//org.codehaus.groovy.runtime.InvokerHelper.invokePogoMethod(InvokerHelper.java:645) app//org.codehaus.groovy.runtime.InvokerHelper.invokeMethod(InvokerHelper.java:628) app//org.codehaus.groovy.runtime.InvokerHelper.invokeMethodSafe(InvokerHelper.java:82) app//nextflow.processor.TaskPollingMonitor$_checkTaskStatus_lambda8.doCall(TaskPollingMonitor.groovy:668) app//nextflow.processor.TaskPollingMonitor$$Lambda$446/0x00007f1b4c457cc0.run(Unknown Source) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-9,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 49,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PathVisitor-6,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 95,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 108,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-10,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 93,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 28,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 104,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 16889),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-4,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Task submitter,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) app//nextflow.processor.TaskPollingMonitor.awaitTasks(TaskPollingMonitor.groovy:388) app//nextflow.processor.TaskPollingMonitor.submitLoop(TaskPollingMonitor.groovy:412) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) java.base@17.0.13-internal/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) java.base@17.0.13-internal/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) java.base@17.0.13-internal/java.lang.reflect.Method.invoke(Method.java:569) app//org.codehaus.groovy.reflection.CachedMethod.invoke(CachedMethod.java:343) app//groovy.lang.MetaMethod.doMethodInvoke(MetaMethod.java:328) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1333) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethodClosure(MetaClassImpl.java:1017) app//groovy.lang.MetaClassImpl.doInvokeMethod(MetaClassImpl.java:1207) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1088) app//groovy.lang.MetaClassImpl.invokeMethod(MetaClassImpl.java:1007) app//groovy.lang.Closure.call(Closure.java:433) app//groovy.lang.Closure.call(Closure.java:412) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 109,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-11,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[main,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) app//nextflow.util.Barrier$_awaitCompletion_closure3.doCall(Barrier.groovy:92) app//nextflow.util.Barrier$_awaitCompletion_closure3.call(Barrier.groovy) app//nextflow.extension.Bolts.withLock(Bolts.groovy:337) app//nextflow.extension.Bolts.withLock(Bolts.groovy) app//nextflow.util.Barrier.awaitCompletion(Barrier.groovy:89) app//nextflow.Session.await(Session.groovy:676) app//nextflow.script.ScriptRunner.await(ScriptRunner.groovy:256) app//nextflow.script.ScriptRunner.execute(ScriptRunner.groovy:144) app//nextflow.cli.CmdRun.run(CmdRun.groovy:376) app//nextflow.cli.Launcher.run(Launcher.groovy:503) app//nextflow.cli.Launcher.main(Launcher.groovy:658) Thread[Actor Thread 2,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 71,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 61,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 50,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 23,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 37,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 83,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-2,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 23264),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18032),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18956),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 13,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 63,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 79,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18131),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 16832),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17384),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17955),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 19,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 40,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[PathVisitor-5,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:252) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:401) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.poll(SynchronousQueue.java:903) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1061) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 91,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-31,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 110,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18386),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 73,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 38,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-3,5,main] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.Object.wait(Object.java:338) java.base@17.0.13-internal/java.lang.ProcessImpl.waitFor(ProcessImpl.java:434) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.doCall(LocalTaskHandler.groovy:109) app//nextflow.executor.local.LocalTaskHandler$_submit_closure1.call(LocalTaskHandler.groovy) app//groovy.lang.Closure.run(Closure.java:505) java.base@17.0.13-internal/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539) java.base@17.0.13-internal/java.util.concurrent.FutureTask.run(FutureTask.java:264) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Finalizer,8,system] java.base@17.0.13-internal/java.lang.Object.wait(Native Method) java.base@17.0.13-internal/java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:155) java.base@17.0.13-internal/java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:176) java.base@17.0.13-internal/java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:172) Thread[Actor Thread 35,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-28,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 112,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 17,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 18327),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[TaskFinalizer-3,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[pool-2-thread-25,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionNode.block(AbstractQueuedSynchronizer.java:506) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.await(AbstractQueuedSynchronizer.java:1630) java.base@17.0.13-internal/java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.java:435) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 20,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 16943),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 68,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[process reaper (pid 17018),10,system] java.base@17.0.13-internal/java.lang.ProcessHandleImpl.waitForProcessExit0(Native Method) java.base@17.0.13-internal/java.lang.ProcessHandleImpl$1.run(ProcessHandleImpl.java:150) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Actor Thread 45,5,main] java.base@17.0.13-internal/jdk.internal.misc.Unsafe.park(Native Method) java.base@17.0.13-internal/java.util.concurrent.locks.LockSupport.park(LockSupport.java:341) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack$SNode.block(SynchronousQueue.java:288) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.unmanagedBlock(ForkJoinPool.java:3465) java.base@17.0.13-internal/java.util.concurrent.ForkJoinPool.managedBlock(ForkJoinPool.java:3436) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue$TransferStack.transfer(SynchronousQueue.java:397) java.base@17.0.13-internal/java.util.concurrent.SynchronousQueue.take(SynchronousQueue.java:886) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1062) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1122) java.base@17.0.13-internal/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635) java.base@17.0.13-internal/java.lang.Thread.run(Thread.java:840) Thread[Reference Handler,10,system] java.base@17.0.13-internal/java.lang.ref.Reference.waitForReferencePendingList(Native Method) java.base@17.0.13-internal/java.lang.ref.Reference.processPendingReferences(Reference.java:253) java.base@17.0.13-internal/java.lang.ref.Reference$ReferenceHandler.run(Reference.java:215) Jan-13 22:29:07.047 [main] DEBUG nextflow.Session - Session await > all processes finished Jan-13 22:29:07.048 [main] DEBUG nextflow.Session - Session await > all barriers passed Jan-13 22:29:07.095 [main] INFO nextflow.script.BaseScript - Jan-13 22:29:07.098 [main] INFO nextflow.script.BaseScript - Completed at : 2025-01-13T22:29:07.067929192+08:00 Jan-13 22:29:07.101 [main] INFO nextflow.script.BaseScript - Duration : 57.2s Jan-13 22:29:07.116 [main] INFO nextflow.script.BaseScript - Processes : 1 (success), 8 (failed) Jan-13 22:29:07.118 [main] INFO nextflow.script.BaseScript - Output in : ./out_folder Nextflow report : ./out_folder/stats Jan-13 22:29:07.120 [main] INFO nextflow.script.BaseScript - Oops .. something went wrong Jan-13 22:29:07.134 [main] WARN n.processor.TaskPollingMonitor - Killing running tasks (33) Jan-13 22:29:07.444 [main] DEBUG n.processor.TaskPollingMonitor - Failed to kill pending tasks: TaskHandler[id: 6; name: omamer_run (B.carinata_B.fa); status: RUNNING; exit: -; error: -; workDir: /home/yankh/extra/OMA/work/40/11de475dc9869a488c4f2f713ec91f] -- cause: Cannot run program "bash": error=11, Resource temporarily unavailable Jan-13 22:29:07.468 [main] DEBUG n.processor.TaskPollingMonitor - Failed to kill pending tasks: TaskHandler[id: 16; name: omamer_run (B.juncea_BJ200_A.fa); status: RUNNING; exit: -; error: -; workDir: /home/yankh/extra/OMA/work/f6/c61b64511a77758af00cef4504a3ef] -- cause: Cannot run program "bash": error=11, Resource temporarily unavailable Jan-13 22:29:08.044 [main] DEBUG n.executor.local.LocalTaskHandler - Unable to kill omamer_run (I.indigotica.fa) -- command: kill -TERM 24624; exit: 1 bash: line 0: kill: (24624) - No such process Jan-13 22:29:08.054 [main] DEBUG n.trace.WorkflowStatsObserver - Workflow completed > WorkflowStats[succeededCount=1; failedCount=8; ignoredCount=0; cachedCount=0; pendingCount=0; submittedCount=0; runningCount=0; retriesCount=7; abortedCount=33; succeedDuration=30s; failedDuration=29.3s; cachedDuration=0ms;loadCpus=0; loadMemory=0; peakRunning=34; peakCpus=34; peakMemory=492 GB; ] Jan-13 22:29:08.055 [main] DEBUG nextflow.trace.TraceFileObserver - Workflow completed -- saving trace file Jan-13 22:29:08.061 [main] DEBUG nextflow.trace.ReportObserver - Workflow completed -- rendering execution report Jan-13 22:29:09.534 [main] DEBUG nextflow.trace.TimelineObserver - Workflow completed -- rendering execution timeline Jan-13 22:29:09.931 [main] DEBUG nextflow.cache.CacheDB - Closing CacheDB done Jan-13 22:29:09.993 [main] DEBUG nextflow.script.ScriptRunner - > Execution complete -- Goodbye