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Tabular to csv convertion add 2 " signs for each existing " sign left and/or right to field text #436

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yvanlebras opened this issue Nov 13, 2021 · 3 comments

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@yvanlebras
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yvanlebras commented Nov 13, 2021

As you can see on this history https://ecology.usegalaxy.eu/u/ylebras/h/test-tuto-sdm-wallace for dataset 5.

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@yvanlebras
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... and looking at the resulting converted file, there is also some issues on some field where comma are kept... it seems some "space" are see as "tabulation"

@yvanlebras
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Maybe it is possible to reintegrate "tabular to csv" tool https://toolshed.g2.bx.psu.edu/view/mnhn65mo/tabular_to_csv/f1b7d0032530 and "csv to tabular" one https://toolshed.g2.bx.psu.edu/view/mnhn65mo/csv_to_tabular/b735ac78702b so the functionality is useable on eu ?

@bgruening
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I guess the proper way is to fix the integrated tool. I think it is this one: https://github.com/galaxyproject/galaxy/blob/dev/lib/galaxy/datatypes/converters/tabular_csv.py

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