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Merged
junwang-noaa merged 9 commits into from
Dec 15, 2020
Merged

Final-final GFS v16 updates / restart reproducibility bugfixes #325

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893170b
Update .gitmodules and submodule pointer for fv3atm for code review a…
climbfuji Dec 10, 2020
af32c5b
Merge branch 'develop' of https://github.com/ufs-community/ufs-weathe…
climbfuji Dec 12, 2020
50548bf
Add GFS v16 beta restart test, update stochastics test
climbfuji Dec 12, 2020
0214283
Update regression test baseline date tag to 20201214; skip-ci
climbfuji Dec 12, 2020
fa250c0
tests/rt.conf: bugfix, add missing 'fv3' to new stochy tests; skip-ci
climbfuji Dec 13, 2020
f631661
Regression test logs for gaea.intel, hera.gnu, hera.intel, jet.intel,…
climbfuji Dec 13, 2020
1e2c32a
Run GFS v16beta tests also on wcoss; regression test logs for wcoss; …
climbfuji Dec 14, 2020
9f643e6
Regression test logs for cheyenne.intel and cheyenne.gnu
climbfuji Dec 14, 2020
2dc4da8
Revert change to .gitmodules and update submodule pointer for fv3atm
climbfuji Dec 14, 2020
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2 changes: 1 addition & 1 deletion FV3
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Submodule FV3 updated from babf6d to 3aad39
284 changes: 207 additions & 77 deletions tests/RegressionTests_cheyenne.gnu.log
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430 changes: 280 additions & 150 deletions tests/RegressionTests_cheyenne.intel.log
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194 changes: 97 additions & 97 deletions tests/RegressionTests_gaea.intel.log
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284 changes: 207 additions & 77 deletions tests/RegressionTests_hera.gnu.log
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625 changes: 378 additions & 247 deletions tests/RegressionTests_hera.intel.log
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2,497 changes: 70 additions & 2,427 deletions tests/RegressionTests_jet.intel.log
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805 changes: 465 additions & 340 deletions tests/RegressionTests_orion.intel.log
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660 changes: 531 additions & 129 deletions tests/RegressionTests_wcoss_cray.log
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792 changes: 597 additions & 195 deletions tests/RegressionTests_wcoss_dell_p3.log
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16 changes: 9 additions & 7 deletions tests/fv3_conf/ccpp_gfs_v16_run.IN
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Original file line number Diff line number Diff line change
@@ -1,11 +1,13 @@
rm -fr INPUT RESTART
if [ $WARM_START = .F. ]; then
cp -r @[INPUTDATA_ROOT]/FV3_input_data/INPUT .
mkdir RESTART
else
mkdir INPUT RESTART
cp -r @[INPUTDATA_ROOT]/FV3_input_data/RESTART/* ./INPUT
rsync -arv @[INPUTDATA_ROOT]/FV3_input_data/INPUT/ INPUT/
mkdir RESTART
if [ $WARM_START = .T. ]; then
rsync -arv ../fv3_ccpp_gfs_v16beta${RT_SUFFIX}/RESTART/ INPUT/
cd INPUT
rename 20161004.000000. '' 20161004.000000.*
cd ..
fi

cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/aerosol.dat .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/co2historicaldata_201*.txt .
cp @[INPUTDATA_ROOT]/FV3_input_data/INPUT/sfc_emissivity_idx.txt .
Expand All @@ -19,5 +21,5 @@ cp @[INPUTDATA_ROOT]/FV3_input_data_gsd/field_table_suite2 field_table
cp @[INPUTDATA_ROOT]/FV3_input_data/*configure .

if [ $DO_RRTMGP = .T. ]; then
cp @[INPUTDATA_ROOT]/FV3_input_data_RRTMGP/* .
cp @[INPUTDATA_ROOT]/FV3_input_data_RRTMGP/* .
fi
67 changes: 35 additions & 32 deletions tests/parm/ccpp_v16beta_c96.nml.IN
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Original file line number Diff line number Diff line change
Expand Up @@ -48,7 +48,7 @@ deflate_level=1
ntiles = 6
npz = 64
grid_type = -1
make_nh = .false.
make_nh = @[MAKE_NH]
fv_debug = .false.
range_warn = .false.
reset_eta = .false.
Expand Down Expand Up @@ -84,11 +84,11 @@ deflate_level=1
delt_max = 0.002
ke_bg = 0.
do_vort_damp = .true.
external_ic = .true.
external_ic = @[EXTERNAL_IC]
external_eta = .true.
gfs_phil = .false.
nggps_ic = .true.
mountain = .false.
nggps_ic = @[NGGPS_IC]
mountain = @[MOUNTAIN]
ncep_ic = .false.
d_con = 1.
hord_mt = 5
Expand All @@ -103,7 +103,7 @@ deflate_level=1
fill = .true.
dwind_2d = .false.
print_freq = 6
warm_start = .false.
warm_start = @[WARM_START]
no_dycore = .false.
z_tracer = .true.
agrid_vel_rst = .true.
Expand Down Expand Up @@ -177,7 +177,7 @@ deflate_level=1
debug = .false.
oz_phys = .F.
oz_phys_2015 = .T.
nstf_name = 2,1,0,0,0
nstf_name = @[NSTF_NAME]
nst_anl = .true.
psautco = 0.0008,0.0005
prautco = 0.00015,0.00015
Expand All @@ -186,11 +186,11 @@ deflate_level=1
ldiag_ugwp = .false.
do_ugwp = .false.
do_tofd = .true.
do_sppt = .true.
do_shum = .true.
do_skeb = .true.
lndp_type = @[LNDP_TYPE]
n_var_lndp = @[N_VAR_LNDP]
do_sppt = @[DO_SPPT]
do_shum = @[DO_SHUM]
do_skeb = @[DO_SKEB]
lndp_type = @[LNDP_TYPE]
n_var_lndp = @[N_VAR_LNDP]
/

&gfdl_cloud_microphysics_nml
Expand Down Expand Up @@ -295,30 +295,33 @@ deflate_level=1
/

&nam_stochy
ntrunc = 766
lon_s = 1536
lat_s = 768
skeb = 0.3
iseed_skeb = 2019102712451
iseed_shum = 2019102712452
iseed_sppt = 2019102712453
skeb_tau = 21600.
skeb_lscale = 500000.
skebnorm = 0
skeb_npass = 30
skeb_vdof = 5
shum = 0.005
shum_tau = 21600.
shum_lscale = 500000.
sppt = 0.5
sppt_tau = 21600.
sppt_lscale = 500000.
sppt_logit = .true.
sppt_sfclimit = .true.
use_zmtnblck = .true.
SKEBNORM=1,
SKEB_NPASS=30,
SKEB_VDOF=5,
SKEB=@[SKEB],
SKEB_TAU=2.16E4,
SKEB_LSCALE=1000.E3,
SKEBINT=1800,
SHUM=@[SHUM],
SHUM_TAU=21600,
SHUM_LSCALE=500000,
SHUMINT=3600,
SPPT=@[SPPT],
SPPT_TAU=21600,
SPPT_LSCALE=500000,
SPPT_LOGIT=.TRUE.,
SPPT_SFCLIMIT=.TRUE.,
SPPTINT=1800,
ISEED_SHUM=1,
ISEED_SKEB=2,
ISEED_SPPT=3,
/

&nam_sfcperts
lndp_type = @[LNDP_TYPE]
LNDP_TAU=21600,
LNDP_LSCALE=500000,
ISEED_LNDP=2010,
/

&cires_ugwp_nml
Expand Down
22 changes: 22 additions & 0 deletions tests/rt.conf
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Original file line number Diff line number Diff line change
Expand Up @@ -111,18 +111,34 @@ RUN | fv3_ccpp_rrfs_v1beta
RUN | fv3_ccpp_rrfs_v1beta | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_rrfs_v1beta | standard | gaea.intel | fv3 |

COMPILE | CCPP=Y SUITES=FV3_GFS_v15p2,FV3_GFS_v16beta,FV3_GFS_v15p2_RRTMGP,FV3_GFS_v16beta_RRTMGP | standard | wcoss_dell_p3 | fv3 |
COMPILE | CCPP=Y SUITES=FV3_GFS_v15p2,FV3_GFS_v16beta,FV3_GFS_v15p2_RRTMGP,FV3_GFS_v16beta_RRTMGP | standard | wcoss_cray | fv3 |
COMPILE | CCPP=Y SUITES=FV3_GFS_v15p2,FV3_GFS_v16beta,FV3_GFS_v15p2_RRTMGP,FV3_GFS_v16beta_RRTMGP | standard | hera.intel | fv3 |
COMPILE | CCPP=Y SUITES=FV3_GFS_v15p2,FV3_GFS_v16beta,FV3_GFS_v15p2_RRTMGP,FV3_GFS_v16beta_RRTMGP | standard | orion.intel | fv3 |
COMPILE | CCPP=Y SUITES=FV3_GFS_v15p2,FV3_GFS_v16beta,FV3_GFS_v15p2_RRTMGP,FV3_GFS_v16beta_RRTMGP | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2 | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2 | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2 | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta | standard | wcoss_dell_p3 | fv3 |
RUN | fv3_ccpp_gfs_v16beta | standard | wcoss_cray | fv3 |
RUN | fv3_ccpp_gfs_v16beta | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_restart | standard | wcoss_dell_p3 | | fv3_ccpp_gfs_v16beta
RUN | fv3_ccpp_gfs_v16beta_restart | standard | wcoss_cray | | fv3_ccpp_gfs_v16beta
RUN | fv3_ccpp_gfs_v16beta_restart | standard | hera.intel | | fv3_ccpp_gfs_v16beta
Comment thread
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RUN | fv3_ccpp_gfs_v16beta_restart | standard | orion.intel | | fv3_ccpp_gfs_v16beta
RUN | fv3_ccpp_gfs_v16beta_restart | standard | cheyenne.intel | | fv3_ccpp_gfs_v16beta
RUN | fv3_ccpp_gfs_v16beta_stochy | standard | wcoss_dell_p3 | fv3 |
RUN | fv3_ccpp_gfs_v16beta_stochy | standard | wcoss_cray | fv3 |
RUN | fv3_ccpp_gfs_v16beta_stochy | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_stochy | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_stochy | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_RRTMGP | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_RRTMGP | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_RRTMGP | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP | standard | wcoss_dell_p3 | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP | standard | wcoss_cray | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP | standard | cheyenne.intel | fv3 |
Expand Down Expand Up @@ -152,18 +168,24 @@ RUN | fv3_ccpp_esg_HAFS_v0_hwrf_thompson
#######################################################################################################################################################################################

# Exercise compilation without specifying suites (i.e. compile all suites) in DEBUG mode (faster than in PROD mode)
COMPILE | CCPP=Y DEBUG=Y | standard | wcoss_dell_p3 | fv3 |
COMPILE | CCPP=Y DEBUG=Y | standard | wcoss_cray | fv3 |
COMPILE | CCPP=Y DEBUG=Y | standard | hera.intel | fv3 |
COMPILE | CCPP=Y SUITES=FV3_GFS_v15p2,FV3_GFS_v16beta,FV3_GFS_v15p2_RRTMGP,FV3_GFS_v16beta_RRTMGP DEBUG=Y | standard | orion.intel | fv3 |
COMPILE | CCPP=Y DEBUG=Y | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_debug | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_debug | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_debug | standard | cheeyenne.intel| fv3 |
RUN | fv3_ccpp_gfs_v16beta_debug | standard | wcoss_dell_p3 | fv3 |
RUN | fv3_ccpp_gfs_v16beta_debug | standard | wcoss_cray | fv3 |
RUN | fv3_ccpp_gfs_v16beta_debug | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_debug | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_debug | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_RRTMGP_debug | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_RRTMGP_debug | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v15p2_RRTMGP_debug | standard | cheyenne.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP_debug | standard | wcoss_dell_p3 | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP_debug | standard | wcoss_cray | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP_debug | standard | hera.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP_debug | standard | orion.intel | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP_debug | standard | cheyenne.intel | fv3 |
Expand Down
4 changes: 2 additions & 2 deletions tests/rt.sh
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Expand Up @@ -423,9 +423,9 @@ if [[ $TESTS_FILE =~ '35d' ]]; then
fi

if [[ $MACHINE_ID = hera.* ]] || [[ $MACHINE_ID = orion.* ]] || [[ $MACHINE_ID = cheyenne.* ]] || [[ $MACHINE_ID = gaea.* ]] || [[ $MACHINE_ID = jet.* ]]; then
RTPWD=${RTPWD:-$DISKNM/NEMSfv3gfs/develop-20201204/${RT_COMPILER^^}}
RTPWD=${RTPWD:-$DISKNM/NEMSfv3gfs/develop-20201214/${RT_COMPILER^^}}
else
RTPWD=${RTPWD:-$DISKNM/NEMSfv3gfs/develop-20201204}
RTPWD=${RTPWD:-$DISKNM/NEMSfv3gfs/develop-20201214}
fi

INPUTDATA_ROOT=${INPUTDATA_ROOT:-$DISKNM/NEMSfv3gfs/input-data-20201201/}
Expand Down
2 changes: 2 additions & 0 deletions tests/rt_gnu.conf
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Original file line number Diff line number Diff line change
Expand Up @@ -9,6 +9,8 @@ COMPILE | CCPP=Y SUITES=FV3_GFS_v15p2,FV3_GFS_v16beta,FV3_GFS_v16beta_flake,FV3_

RUN | fv3_ccpp_gfs_v15p2 | standard | | fv3 |
RUN | fv3_ccpp_gfs_v16beta | standard | | fv3 |
RUN | fv3_ccpp_gfs_v16beta_restart | standard | | | fv3_ccpp_gfs_v16beta
RUN | fv3_ccpp_gfs_v16beta_stochy | standard | | fv3 |
RUN | fv3_ccpp_gfs_v16beta_flake | standard | | fv3 |
RUN | fv3_ccpp_gfs_v15p2_RRTMGP | standard | | fv3 |
RUN | fv3_ccpp_gfs_v16beta_RRTMGP | standard | | fv3 |
Expand Down
18 changes: 18 additions & 0 deletions tests/tests/fv3_ccpp_gfs_v16beta
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Expand Up @@ -26,6 +26,12 @@ export LIST_FILES="atmos_4xdaily.tile1.nc \
phyf024.tile4.nc \
phyf024.tile5.nc \
phyf024.tile6.nc \
phyf048.tile1.nc \
phyf048.tile2.nc \
phyf048.tile3.nc \
phyf048.tile4.nc \
phyf048.tile5.nc \
phyf048.tile6.nc \
dynf000.tile1.nc \
dynf000.tile2.nc \
dynf000.tile3.nc \
Expand All @@ -38,6 +44,12 @@ export LIST_FILES="atmos_4xdaily.tile1.nc \
dynf024.tile4.nc \
dynf024.tile5.nc \
dynf024.tile6.nc \
dynf048.tile1.nc \
dynf048.tile2.nc \
dynf048.tile3.nc \
dynf048.tile4.nc \
dynf048.tile5.nc \
dynf048.tile6.nc \
RESTART/coupler.res \
RESTART/fv_core.res.nc \
RESTART/fv_core.res.tile1.nc \
Expand Down Expand Up @@ -76,8 +88,14 @@ export_fv3

DT_ATMOS="1200"

export FHMAX=48
export RESTART_INTERVAL=24

export NSTF_NAME=2,1,0,0,0

export FV3_RUN=ccpp_gfs_v16_run.IN
export CCPP_SUITE=FV3_GFS_v16beta
export CCPP_LIB_DIR=ccpp/lib
export INPUT_NML=ccpp_v16beta_c96.nml.IN

export WLCLK=30
2 changes: 2 additions & 0 deletions tests/tests/fv3_ccpp_gfs_v16beta_debug
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Expand Up @@ -76,6 +76,8 @@ export_fv3
export FHMAX="06"
DT_ATMOS="1200"

export NSTF_NAME=2,1,0,0,0

export FV3_RUN=ccpp_gfs_v16_run.IN
export CCPP_SUITE=FV3_GFS_v16beta
export CCPP_LIB_DIR=ccpp/lib
Expand Down
75 changes: 75 additions & 0 deletions tests/tests/fv3_ccpp_gfs_v16beta_restart
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@@ -0,0 +1,75 @@
###############################################################################
#
# FV3 CCPP GFS v16beta compiled with 32-bit dynamics test
#
###############################################################################

export TEST_DESCR="Compare FV3 32bit CCPP GFS v16beta results with previous trunk version"

export CNTL_DIR=fv3_gfs_v16beta

export LIST_FILES="phyf048.tile1.nc \
phyf048.tile2.nc \
phyf048.tile3.nc \
phyf048.tile4.nc \
phyf048.tile5.nc \
phyf048.tile6.nc \
dynf048.tile1.nc \
dynf048.tile2.nc \
dynf048.tile3.nc \
dynf048.tile4.nc \
dynf048.tile5.nc \
dynf048.tile6.nc \
RESTART/coupler.res \
RESTART/fv_core.res.nc \
RESTART/fv_core.res.tile1.nc \
RESTART/fv_core.res.tile2.nc \
RESTART/fv_core.res.tile3.nc \
RESTART/fv_core.res.tile4.nc \
RESTART/fv_core.res.tile5.nc \
RESTART/fv_core.res.tile6.nc \
RESTART/fv_srf_wnd.res.tile1.nc \
RESTART/fv_srf_wnd.res.tile2.nc \
RESTART/fv_srf_wnd.res.tile3.nc \
RESTART/fv_srf_wnd.res.tile4.nc \
RESTART/fv_srf_wnd.res.tile5.nc \
RESTART/fv_srf_wnd.res.tile6.nc \
RESTART/fv_tracer.res.tile1.nc \
RESTART/fv_tracer.res.tile2.nc \
RESTART/fv_tracer.res.tile3.nc \
RESTART/fv_tracer.res.tile4.nc \
RESTART/fv_tracer.res.tile5.nc \
RESTART/fv_tracer.res.tile6.nc \
RESTART/sfc_data.tile1.nc \
RESTART/sfc_data.tile2.nc \
RESTART/sfc_data.tile3.nc \
RESTART/sfc_data.tile4.nc \
RESTART/sfc_data.tile5.nc \
RESTART/sfc_data.tile6.nc \
RESTART/phy_data.tile1.nc \
RESTART/phy_data.tile2.nc \
RESTART/phy_data.tile3.nc \
RESTART/phy_data.tile4.nc \
RESTART/phy_data.tile5.nc \
RESTART/phy_data.tile6.nc"


export_fv3

DT_ATMOS="1200"

export FHMAX=48
export RESTART_INTERVAL=24

export WARM_START=.T.
export NGGPS_IC=.F.
export EXTERNAL_IC=.F.
export MAKE_NH=.F.
export MOUNTAIN=.T.
export NSTF_NAME=2,0,0,0,0

export FV3_RUN=ccpp_gfs_v16_run.IN
export CCPP_SUITE=FV3_GFS_v16beta
export CCPP_LIB_DIR=ccpp/lib
export INPUT_NML=ccpp_v16beta_c96.nml.IN

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