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Sequences with different lengths #52

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asierFernandezP opened this issue Dec 16, 2022 · 1 comment

asierFernandezP commented Dec 16, 2022

Hi,

Is it possible to perform the snp-dists analysis with a fasta file of sequences with different lengths as input?

Thanks in advance,

Asier

Contributor

kloetzl commented Dec 17, 2022

No. snp-dists requires all sequences to be of identical length. If your sequences are of varying length you have to align them first.

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