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[shovill] Can't see adapter file: /usr/local/db/trimmomatic.fa #177

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MuhammadMuaazAslam opened this issue Nov 2, 2023 · 0 comments
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@MuhammadMuaazAslam
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My Command:

shovill --outdir ./ --R1 CLL_R1.fastq.gz --R2 CLL_R2.fastq.gz

Error:
[shovill] This is shovill 1.1.0
[shovill] Written by Torsten Seemann
[shovill] Homepage is https://github.com/tseemann/shovill
[shovill] Operating system is linux
[shovill] Perl version is v5.22.0
[shovill] Machine has 8 CPU cores and 31.28 GB RAM
[shovill] Can't see adapter file: /usr/local/db/trimmomatic.fa

I am not trying to trim adapters. How to avoid this error?

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