Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
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Updated
Jul 7, 2023 - Python
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Rare variant test software for next generation sequencing data
Learning the Variant Call Format
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
Rapid standardisation and quality control of GWAS or QTL summary statistics
A phenotype-based tool for variant prioritization in WES and WGS data
A python parser to simplify and build the VCF (Variant Call Format).
Evolutionary Bioinformatics Toolkit (EBT)
Visualize microbial evolution at the SNP level!
visual analysis of your VCF files
Converts phonebook Fritzbox between .xml <=> .csv or .vcf (webapp) ; DE: konvertiert Telefonbuch Datei
Intersect multiple VCF files with haplotype awareness
Generate an interactive HTML-based report from M.tb SnpEff annotated VCF(s)
create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks
CNV analysis based on the depth of coverage of Illumina data
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