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splice-graphs

Here are 2 public repositories matching this topic...

bcgsc / ChopStitch

Finding putative exons and constructing splicegraphs using Trans-ABySS contigs

splice bloom-filter exon transcriptome-assembly putative-exons splice-graphs

Updated Nov 8, 2018
C++

jlanga / exfi

Get exons from a transcriptome and raw genomic reads using abyss-bloom and bedtools

rna-seq network assembly bloom-filter conda pandas python3 biopython bioconda kmer transcriptome transcriptomics bedtools exon abyss splice-graphs biobloomtools abyss-bloom

Updated Jul 28, 2020
Python

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