Serial-section automated anatomy extension for ScanImage
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Updated
Jul 12, 2024 - MATLAB
Serial-section automated anatomy extension for ScanImage
Kind of like CUPS but it's for scanning, not printing. Preform a scan on your flatbed scanner from the web browser.
Measure PSF FWHM along different axes
Scan to PDF (scan2pdf) - Scan documents directly to PDF files from the command line. Especially useful to batch-scan large volumes of documents.
DAQmx Examples using MATLAB
utility functions for analyzing (fly) calcium imaging data
Scan Image Linux GUI HP Simple Scans
Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).
code for 2p imaging experiments that syncs I/O and hardware triggers to neural data acquisition (pupil tracking camera, stimulus presentation, etc.)
MATLAB tools for running imaging experiments with ScanImage
Perform registration of 3D imaging data and localization of spots (synapses/boutons) in semi-automatic mode (with graphical user interface).
Matlab TIFF Stack Reader for ScanImage 5 scans (including multiROI).
Perform alternating beam scanning with Scanimage (public release version SI55R1).
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