Scripts used for analysis in this manuscript
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Updated
Oct 31, 2023 - Python
Scripts used for analysis in this manuscript
CYCASP is a methodology for investigating and understanding (C)olon(Y) growth and (C)ell (A)ttributes at the population level. It couples (SP)atiotemporal changes by relying on two novel data abstractions and a modular algorithm.
Leveraging sqlglot for metadata collection from sql queries
This project aims to address recurring challenges in understanding SQL queries and extracting metadata.
This repository contains the result of using a semi-automatic workflow for classifying Dengue virus (DENV) based on complete genome sequences. It addresses the current limitations in sub-genotype classification, offering a more granular and standardized system compared to traditional methods.
Correlates target taxonomy(i.e consensus lineages) with a reference taxonomy such as Greengenes, SILVA, etc.
Python library to deal with taxonomic IDs and lineages from the NCBI's Taxdump files
Just Another Buildbot (python 3.7 and up only)
Runtime data integration system that empowers any data processing system to capture and query workflow provenance using data observability.
Single-cell Lineage on Targeted Hypermutation
Open-source GCP metadata collector based on ODD Specification
Extract Lineage OS APKs from Latest Zip files and upload to Github Releases.
CLI and GitHub-Action to configure and maintain CDF Projects (Groups, Data Sets, RAW DBs)
Get column-level lineage from Presto SQL Views
Parse SQL statements and extract metadata and lineage information from it.
A proof of concept of how to integrate Spark Lineage in Azure Purview
A data lineage tool detects table dependencies from rendered SQL statements.
CMF library helps to collect and store information associated with ML pipelines. It tracks the lineages for artifacts and executions of distributed AI pipelines. It provides API's to record and query the metadata associated with ML pipelines. The framework adopts a data first approach and all artifacts recorded in the framework are versioned and…
Open-source metadata collector based on ODD Specification
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