Algorithms to emulate the synthesis process of proteins.
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Updated
Jun 7, 2016 - Python
Algorithms to emulate the synthesis process of proteins.
LCS is an algorithm to find the Longest Common Subsequence between two Strings.
This is experiment to measure performance in vg recalibrate, testing different models.
Multiple Objective Optimization work for optimizing aptamer binding to new targets done in collaboration with Chris Knight and Josh Knowles
Comparing the effects of MDMA and Venlafaxine on Dark Agouti Rats
A set of Matlab scripts which can simulate temporal traces of DNA using CTMC
The repository contains simulation code for strand displacing polymerase paper presented at DNA 25, Seattle, US
This program can detect repeated sequences in DNA.
Codecademy exercise (JavaScript). Steps are described in the code itself.
A small javascript tool for DNA data compression. Can compress the DNA string up to 4-8 times.
Converts DNA to Protein along 1, 6 (fwd or reverse strand) or user defined frames
DNA - CS50
Repeated DNA is what makes up a large portion of a species' genome, and some of these DNA elements are able to move within the genome, we refer to them as transposons and retrotransposons. Transposons in the DNA move from one location to another by a duplicating mechanism. When it comes to cancer cells, these DNA transposons can be used to intro…
DNA barcoding analysis pipeline
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