Requesting script for LIGER dataintegration on ATAC-seq data

[AndreasHHaugaard]

Hallo, I wanna ask if its possible for you to upload the code used for data-integration of ATAC-sequencing data with LIGER :)

[LuckyMD]

Hi @AndreasHHaugaard,
Please check out the scib-pipeline repo for the code for all integration runs. As all integration runs were done with the same pipeline (for scRNA-seq and scATAC), we don't have a separate script for a particular integration run.