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Merge pull request #87 from theislab/batch_corr_labels #115

Merge pull request #87 from theislab/batch_corr_labels

Merge pull request #87 from theislab/batch_corr_labels #115

Workflow file for this run

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: scgen-test
on:
push:
branches: [master]
pull_request:
branches: [master, pytorch]
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10"]
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Cache pip
uses: actions/cache@v2
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Install dependencies
run: |
pip install pytest-cov
pip install .[dev]
- name: Lint with flake8
run: |
flake8
- name: Format with black
run: |
black --check .
- name: Test with pytest
run: |
pytest --cov-report=xml --cov=mypackage
- name: After success
run: |
bash <(curl -s https://codecov.io/bash)
pip list