Skip to content

Commit 1ae0d71

Browse files
committed
Shade the FALDO examples (may not be within style...)
We may end up using Figures for the examples, easier to cross-reference etc.
1 parent 63b98fd commit 1ae0d71

File tree

2 files changed

+5
-0
lines changed

2 files changed

+5
-0
lines changed

locations.tex

+3
Original file line numberDiff line numberDiff line change
@@ -11,6 +11,9 @@
1111
%\usepackage[latin1]{inputenc} %UNIX support if unicode package fails
1212
\urlstyle{rm}
1313

14+
%Shaded framed
15+
\usepackage{framed,color}
16+
\definecolor{shadecolor}{rgb}{0.96,0.96,0.96}
1417

1518
\def\includegraphic{}
1619
\def\includegraphics{}

results.tex

+2
Original file line numberDiff line numberDiff line change
@@ -24,6 +24,7 @@ \section*{Results}
2424
interpretation of a feature location on the reverse strand:
2525

2626
%Notice begin, end = 1965461, 1965072 (biological interpretation)
27+
\begin{shaded}
2728
\begin{verbatim}
2829
# Incomplete Turtle format triples example using FALDO to describe
2930
# gene chrY being at complement(NC_000913.2:1965072..1965461)
@@ -52,6 +53,7 @@ \section*{Results}
5253
faldo:position "1965072"^^xsd:int ;
5354
faldo:reference refseq:NC_000913.2 .
5455
\end{verbatim}
56+
\end{shaded}
5557

5658
In contrast, other formats like GFF require $start \leq end$
5759
regardless of the strand, which is equivalent to interpreting

0 commit comments

Comments
 (0)