.gitignore

# Here
resources/*
not-public/*

# Compiled source #
###################
*.com
*.class
*.dll
*.exe
*.o
*.so

# Packages #
############
# it's better to unpack these files and commit the raw source
# git has its own built in compression methods
*.7z
*.dmg
*.gz
*.iso
*.jar
*.rar
*.tar
*.zip

# Logs and databases #
######################
*.log
*.sql
*.sqlite

# OS generated files #
######################
.DS_Store
.DS_Store?
._*
.Spotlight-V100
.Trashes
ehthumbs.db
Thumbs.db

# from tex files #
#################
*.aux
*.glo
*.idx
*.log
*.toc
*.ist
*.acn
*.acr
*.alg
*.bbl
*.blg
*.dvi
*.glg
*.gls
*.ilg
*.ind
*.lof
*.lot
*.maf
*.mtc
*.mtc1
*.synctex.gz
*.pdf
*.bst


# Mac IDE files
*.swp
*~
*(Autosaved).rtfd/
Backup[ ]of[ ]*.pages/
Backup[ ]of[ ]*.key/
Backup[ ]of[ ]*.numbers/


# julia or R
*.juliahistory
*.Rhistory
*.err
*.RData
*.Rda
*.rds
*.jld
*.Rproj*
*.Ruserdata

# open office
*.odt
*.csv

# inkscape drawings
*.svg
*.eps
*.jpg
*.jpeg
*.png
*.dot
*.json

# dropbox
.dropbox

# keynote
*.key

### office
*.xls*
*.doc*
*.ppt*


### plink
*.raw
*.bed
*.bim
*.fam
*.ped
*.map
*.frq
*.imiss
*.lmiss
*.vcf
*.tsv
*.cov
*.dosage
*.prob
*.freq
*.nosex

## html
*.html
*.css
*.js
*.ttf

### sequences
*.aln
*.fna
*.faa
*.fasta
*.fa
*.dat
*.paml

### Mathematica
*.nb