From ea17d30f4c64f5e5303120bbaa707fb4d3a023b9 Mon Sep 17 00:00:00 2001 From: Milot Mirdita Date: Tue, 18 Apr 2023 14:45:05 +0900 Subject: [PATCH] Use NOSORT in concatdbs to avoid issues with differently ordered parts of sequence dbs (e.g. header and seq db) --- src/commons/DBConcat.cpp | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/commons/DBConcat.cpp b/src/commons/DBConcat.cpp index f98a723d9..0abebfceb 100644 --- a/src/commons/DBConcat.cpp +++ b/src/commons/DBConcat.cpp @@ -43,8 +43,8 @@ DBConcat::DBConcat(const std::string &dataFileNameA, const std::string &indexFil } DBReader dbA(dataFileNameA.c_str(), indexFileNameA.c_str(), threads, mode); DBReader dbB(dataFileNameB.c_str(), indexFileNameB.c_str(), threads, mode); - dbA.open(DBReader::LINEAR_ACCCESS); - dbB.open(DBReader::LINEAR_ACCCESS); + dbA.open(DBReader::NOSORT); + dbB.open(DBReader::NOSORT); indexSizeA = dbA.getSize(); indexSizeB = dbB.getSize();