You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
With Docker profile (with export CONDA_SUBDIR=osx-64):
ERROR ~ Error executing process > 'NF_AGGREGATE:SEQERA_RUNS_DUMP (38QXz4OfQDpwOV)'
Caused by:
Process `NF_AGGREGATE:SEQERA_RUNS_DUMP (38QXz4OfQDpwOV)` terminated with an error exit status (1)
Command executed:
tw \
\
--url=https://api.tower.nf \
--access-token=$TOWER_ACCESS_TOKEN \
runs \
dump \
-id=38QXz4OfQDpwOV \
--workspace=community/showcase \
--output="38QXz4OfQDpwOV.tar.gz" \
--add-task-logs --add-fusion-logs
mkdir 38QXz4OfQDpwOV
tar \
-xvf \
38QXz4OfQDpwOV.tar.gz \
-C 38QXz4OfQDpwOV
cp 38QXz4OfQDpwOV/workflow.json .
cat <<-END_VERSIONS > versions.yml
"NF_AGGREGATE:SEQERA_RUNS_DUMP":
seqera-cli: $(echo $(tw --version 2>&1) | sed 's/^.*Tower CLI version //; s/ *$//')
END_VERSIONS
Command exit status:
1
Command output:
(empty)
Command error:
The current machine does not support all of the following CPU features that are required by the image: [CX8, CMOV, FXSR, MMX, SSE, SSE2, SSE3, SSSE3, SSE4_1, SSE4_2, POPCNT, LZCNT, AVX, AVX2, BMI1, BMI2, FMA].
Please rebuild the executable with an appropriate setting of the -march option.
Work dir:
/Users/jonathan.manning/projects/nf-aggregate/work/5d/ba6e256d861a138dbdef13f0475bf4
Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`
-- Check '.nextflow.log' file for details
With conda:
ERROR ~ Error executing process > 'NF_AGGREGATE:SEQERA_RUNS_DUMP (2lXd1j7OwZVfxh)'
Caused by:
Process `NF_AGGREGATE:SEQERA_RUNS_DUMP (2lXd1j7OwZVfxh)` terminated with an error exit status (137)
Command executed:
tw \
\
--url=https://api.tower.nf \
--access-token=$TOWER_ACCESS_TOKEN \
runs \
dump \
-id=2lXd1j7OwZVfxh \
--workspace=community/showcase \
--output="2lXd1j7OwZVfxh.tar.gz" \
--add-task-logs --add-fusion-logs
mkdir 2lXd1j7OwZVfxh
tar \
-xvf \
2lXd1j7OwZVfxh.tar.gz \
-C 2lXd1j7OwZVfxh
cp 2lXd1j7OwZVfxh/workflow.json .
cat <<-END_VERSIONS > versions.yml
"NF_AGGREGATE:SEQERA_RUNS_DUMP":
seqera-cli: $(echo $(tw --version 2>&1) | sed 's/^.*Tower CLI version //; s/ *$//')
END_VERSIONS
Command exit status:
137
Command output:
(empty)
Command error:
.command.sh: line 11: 85350 Killed: 9 tw --url=https://api.tower.nf --access-token=$TOWER_ACCESS_TOKEN runs dump -id=2lXd1j7OwZVfxh --workspace=community/showcase --output="2lXd1j7OwZVfxh.tar.gz" --add-task-logs --add-fusion-logs
Work dir:
/Users/jonathan.manning/projects/nf-aggregate/work/5e/42bd1d4d5748b4db6973e837813fcf
Tip: you can replicate the issue by changing to the process work dir and entering the command `bash .command.run`
-- Check '.nextflow.log' file for details
The text was updated successfully, but these errors were encountered:
My usual Mac tricks fail here.
With Docker profile (with
export CONDA_SUBDIR=osx-64
):With conda:
The text was updated successfully, but these errors were encountered: