Merge remote-tracking branch 'origin/v9-minor'

Author: scip-ci

Diff for: CHANGELOG

@@ -150,6 +150,7 @@ Fixed bugs
 
 - apply same feasibility definition in PaPILO as SCIP to avoid numerical inconsistencies
 - check variable cancellation in SCIPvarAddVlb() and SCIPvarAddVub() to avert wrong infeasibility
+- SCIPfreeReoptSolve now also clears the partial solutions
 
 Unit tests
 ----------

Diff for: INSTALL.md

@@ -52,7 +52,8 @@ make install                                                                  #
 Note: For a full ctest run `ctest` instead of `make check` after compilation.
 
 CMake checks for available third-party libraries like GMP or ZLIB and sets up the configuration accordingly.
-Note that the symmetry codes [Bliss](https://users.aalto.fi/~tjunttil/bliss/) and [Sassy](https://github.com/markusa4/sassy) are shipped with SCIP.
+Note that the symmetry codes [Nauty](https://pallini.di.uniroma1.it/) and [Sassy](https://github.com/markusa4/sassy) are shipped with SCIP.
+A version of Bliss that is compatible with SCIP is available at https://github.com/scipopt/bliss.
 
 Note: Here is a list of apt package requirements for ubuntu or debian users that want to build the entire SCIP Optimization Suite from source tarball:
 ```
@@ -185,7 +186,7 @@ e.g., `cmake </path/to/SCIP> -DSOPLEX_DIR=<path/to/SoPlex/build/or/install>`.
 | `IPOPT`                | `on`, `off`                        | `IPOPT=[true,false]`       | requires IPOPT version >= 3.12.0; specify `IPOPT_DIR` if not found automatically |
 | `LAPACK`               | `on`, `off`                        | `LAPACK=[true,false]`      | requires Lapack to be installed on the system                      |
 | `LPS`                  | `spx`, `cpx`, `grb`, `xprs`, ...   | `LPS=...`                  | specify `SOPLEX_DIR`, `CPLEX_DIR`, `MOSEK_DIR`, ... if LP solver is not found automatically |
-| `SYM`                  | `bliss`, `sbliss`, `none`, ...     | `SYM=[bliss, sbliss, none]`| choose symmetry handling                                           |
+| `SYM`                  | `nauty`, `snauty`, `none`, ...     | `SYM=[nauty, snauty, none]`| choose symmetry handling                                           |
 | `WORHP`                | `on`, `off`                        | `WORHP=[true,false]`       | should worhp be linked; specify `WORHP_DIR` if not found automatically |
 | `ZIMPL`                | `on`, `off`                        | `ZIMPL=[true, false]`      | specify `ZIMPL_DIR` if not found automatically                     |
 | `AMPL`                 | `on`, `off`                        | `AMPL=[true, false]`       |                                                                    |
@@ -346,7 +347,7 @@ In your SCIP main directory, enter `make [options]` with the following options:
 | `PAPILO=false`        | `[false, true]`      | to disable or disable the MILP presolver based on the presolving library PaPILO                  |
 | `READLINE=true`       | `[true, false]`      | to enable or disable readline library for interactive shell                                      |
 | `SHARED=false`        | `[false, true]`      | to suppress or create shared libraries (only Gnu compiler)                                       |
-| `SYM=none`            | `[none, bliss, sbliss, nauty, snauty]` | to choose method for computing symmetries in mixed nonlinear integer programs                  |
+| `SYM=none`            | `[none, nauty, snauty, bliss, sbliss]` | to choose method for computing symmetries in mixed nonlinear integer programs                  |
 | `TPI=none`            | `[none, omp, tny]`   | to disable the task processing interface or use it with the openmp or tinycthreads interface for concurrent solves |
 | `VERBOSE=false`       | `[false, true]`      | to suppress or display of compiler and linker invocations                                        |
 | `WORHP=false`         | `[false, true]`      | to disable or enable WORHP interface (needs WORHP >= 2.00)                                       |

Diff for: doc/xternal.c

@@ -8438,14 +8438,12 @@
  * invariant. To detect such formulation symmetries, SCIP builds an auxiliary colored graph whose
  * color-preserving automorphisms correspond to symmetries of the integer program. The symmetries of
  * the graph, and thus of the integer program, are then computed by an external graph automorphism
- * library that needs to be linked to SCIP. Currently, SCIP ships with two such libraries: The graph
+ * library that needs to be linked to SCIP. Currently, SCIP can use two such libraries: The graph
  * automorphism libraries bliss or nauty/traces are the basic workhorses to detect symmetries. Moreover, one can use
  * sassy, a graph symmetry preprocessor which passes the preprocessed graphs to bliss or nauty/traces.
- * The current default is to use bliss in combination with sassy for symmetry detection.
- *
- * @note To detect symmetries, SCIP needs to be built with sassy/bliss, which can be achieved
- * by using the options <code>SYM=sassy</code> and <code>-DSYM=sassy</code> in the Makefile and CMake
- * system, respectively.
+ * The current default is to use nauty in combination with sassy for symmetry detection.
+ * To use other symmetry packages, options <code>SYM</code> and <code>-DSYM</code> in the Makefile and CMake
+ * system, respectively, need to be set.
  *
  * Besides purely integer linear problems, SCIP also supports symmetry detection for general
  * constraint mixed-integer programs containing most of the constraint types that can be handled

Diff for: src/scip/primal.c

@@ -162,34 +162,10 @@ SCIP_RETCODE SCIPprimalFree(
    BMS_BLKMEM*           blkmem              /**< block memory */
    )
 {
-   int s;
-
    assert(primal != NULL);
    assert(*primal != NULL);
 
-   /* free temporary solution for storing current solution */
-   if( (*primal)->currentsol != NULL )
-   {
-      SCIP_CALL( SCIPsolFree(&(*primal)->currentsol, blkmem, *primal) );
-   }
-
-   /* free solution for storing primal ray */
-   if( (*primal)->primalray != NULL )
-   {
-      SCIP_CALL( SCIPsolFree(&(*primal)->primalray, blkmem, *primal) );
-   }
-
-   /* free feasible primal CIP solutions */
-   for( s = 0; s < (*primal)->nsols; ++s )
-   {
-      SCIP_CALL( SCIPsolFree(&(*primal)->sols[s], blkmem, *primal) );
-   }
-   /* free partial CIP solutions */
-   for( s = 0; s < (*primal)->npartialsols; ++s )
-   {
-      SCIP_CALL( SCIPsolFree(&(*primal)->partialsols[s], blkmem, *primal) );
-   }
-   assert((*primal)->nexistingsols == 0);
+   SCIP_CALL( SCIPprimalClear(*primal, blkmem) );
 
    BMSfreeMemoryArrayNull(&(*primal)->sols);
    BMSfreeMemoryArrayNull(&(*primal)->partialsols);
@@ -201,43 +177,50 @@ SCIP_RETCODE SCIPprimalFree(
 
 /** clears primal data */
 SCIP_RETCODE SCIPprimalClear(
-   SCIP_PRIMAL**         primal,             /**< pointer to primal data */
+   SCIP_PRIMAL*          primal,             /**< pointer to primal data */
    BMS_BLKMEM*           blkmem              /**< block memory */
    )
 {
    int s;
 
    assert(primal != NULL);
-   assert(*primal != NULL);
 
    /* free temporary solution for storing current solution */
-   if( (*primal)->currentsol != NULL )
+   if( primal->currentsol != NULL )
    {
-      SCIP_CALL( SCIPsolFree(&(*primal)->currentsol, blkmem, *primal) );
+      SCIP_CALL( SCIPsolFree(&primal->currentsol, blkmem, primal) );
    }
 
    /* free solution for storing primal ray */
-   if( (*primal)->primalray != NULL )
+   if( primal->primalray != NULL )
    {
-      SCIP_CALL( SCIPsolFree(&(*primal)->primalray, blkmem, *primal) );
+      SCIP_CALL( SCIPsolFree(&primal->primalray, blkmem, primal) );
    }
 
    /* free feasible primal CIP solutions */
-   for( s = 0; s < (*primal)->nsols; ++s )
+   for( s = 0; s < primal->nsols; ++s )
    {
-      SCIP_CALL( SCIPsolFree(&(*primal)->sols[s], blkmem, *primal) );
+      SCIP_CALL( SCIPsolFree(&primal->sols[s], blkmem, primal) );
    }
 
-   (*primal)->currentsol = NULL;
-   (*primal)->primalray = NULL;
-   (*primal)->nsols = 0;
-   (*primal)->nsolsfound = 0;
-   (*primal)->nlimsolsfound = 0;
-   (*primal)->nbestsolsfound = 0;
-   (*primal)->nlimbestsolsfound = 0;
-   (*primal)->upperbound = SCIP_INVALID;
-   (*primal)->cutoffbound = SCIP_INVALID;
-   (*primal)->updateviolations = TRUE;
+   /* free partial CIP solutions */
+   for( s = 0; s < primal->npartialsols; ++s )
+   {
+      SCIP_CALL( SCIPsolFree(&primal->partialsols[s], blkmem, primal) );
+   }
+   assert(primal->nexistingsols == 0);
+
+   primal->currentsol = NULL;
+   primal->primalray = NULL;
+   primal->nsols = 0;
+   primal->nsolsfound = 0;
+   primal->npartialsols = 0;
+   primal->nlimsolsfound = 0;
+   primal->nbestsolsfound = 0;
+   primal->nlimbestsolsfound = 0;
+   primal->upperbound = SCIP_INVALID;
+   primal->cutoffbound = SCIP_INVALID;
+   primal->updateviolations = TRUE;
 
    return SCIP_OKAY;
 }

Diff for: src/scip/primal.h

@@ -67,7 +67,7 @@ SCIP_RETCODE SCIPprimalFree(
 
 /** clears primal data */
 SCIP_RETCODE SCIPprimalClear(
-   SCIP_PRIMAL**         primal,             /**< pointer to primal data */
+   SCIP_PRIMAL*          primal,             /**< pointer to primal data */
    BMS_BLKMEM*           blkmem              /**< block memory */
    );
 

Diff for: src/scip/scip_solve.c

@@ -1812,7 +1812,7 @@ SCIP_RETCODE freeReoptSolve(
    }
 
    /* free the debug solution which might live in transformed primal data structure */
-   SCIP_CALL( SCIPprimalClear(&scip->primal, scip->mem->probmem) );
+   SCIP_CALL( SCIPprimalClear(scip->primal, scip->mem->probmem) );
 
    if( scip->set->misc_resetstat )
    {