-
Notifications
You must be signed in to change notification settings - Fork 3
/
modules.json
108 lines (108 loc) · 4.77 KB
/
modules.json
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
{
"name": "sanger-tol/variantcalling",
"homePage": "https://github.com/sanger-tol/variantcalling",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"bcftools/concat": {
"branch": "master",
"git_sha": "d1e0ec7670fa77905a378627232566ce54c3c26d",
"installed_by": ["modules"]
},
"blast/blastn": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"cat/cat": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"custom/dumpsoftwareversions": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"deepvariant/rundeepvariant": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"gunzip": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"minimap2/align": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"samtools/collate": {
"branch": "master",
"git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
"installed_by": ["modules"]
},
"samtools/faidx": {
"branch": "master",
"git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
"installed_by": ["modules"]
},
"samtools/fasta": {
"branch": "master",
"git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
"installed_by": ["modules"]
},
"samtools/fastq": {
"branch": "master",
"git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
"installed_by": ["modules"]
},
"samtools/flagstat": {
"branch": "master",
"git_sha": "2d20463181b1c38981a02e90d3084b5f9fa8d540",
"installed_by": ["modules"]
},
"samtools/idxstats": {
"branch": "master",
"git_sha": "2d20463181b1c38981a02e90d3084b5f9fa8d540",
"installed_by": ["modules"]
},
"samtools/merge": {
"branch": "master",
"git_sha": "b13f07be4c508d6ff6312d354d09f2493243e208",
"installed_by": ["modules"]
},
"samtools/sort": {
"branch": "master",
"git_sha": "b7800db9b069ed505db3f9d91b8c72faea9be17b",
"installed_by": ["modules"]
},
"samtools/stats": {
"branch": "master",
"git_sha": "2d20463181b1c38981a02e90d3084b5f9fa8d540",
"installed_by": ["modules"]
},
"samtools/view": {
"branch": "master",
"git_sha": "2d20463181b1c38981a02e90d3084b5f9fa8d540",
"installed_by": ["modules"],
"patch": "modules/nf-core/samtools/view/samtools-view.diff"
},
"untar": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"vcftools": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
}
}
}
}
}
}