From 7fe58fca4ab29ee5471a75f2f5de537ea45da910 Mon Sep 17 00:00:00 2001
From: SandraBabirye <babiryesandrachana@gmail.com>
Date: Mon, 23 Sep 2024 05:00:30 -0500
Subject: [PATCH] added -y argument to the GFFREAD process

---
 conf/modules.config | 1 +
 1 file changed, 1 insertion(+)

diff --git a/conf/modules.config b/conf/modules.config
index 98055a2..81a65ae 100644
--- a/conf/modules.config
+++ b/conf/modules.config
@@ -135,5 +135,6 @@ process {
             saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
         ]
     }
+    withName: GFFREAD { ext.args   = "-y" }
 
 }