parameters.json

{
    "deepsol1":{
        "attention":null,
	"batch_size":64,
	"cnn_config":"2:3:4:5:6:7:8:9:10:11:12:13:14:15,64:64:64:64:64:64:64:128:128:128:128:128:128:128,global",
	"em_drop":0.2,
	"embedding_dim":64,
        "fc_config":"64,0.2",
	"optim_config":"adam,0.001",
	"rnn_bidirectional":null,
	"rnn_config":null
    },
    "deepsol2":{
        "attention":null,
        "batch_size":16,
        "cnn_config":"3:5:7:9:11:13:15,64:64:64:128:128:128:128,global",
        "em_drop":0.2,
        "embedding_dim":64,
        "fc_config":"64,0.2",
        "optim_config":"adam,0.001",
        "rnn_bidirectional":null,
        "rnn_config":null,
        "biofeats":"yes",
        "protein_seq_feats":"yes",
        "num_bio_feats":57
    },
    "deepsol3":{
        "attention":null,
        "batch_size":16,
        "cnn_config":"2:3:4:5:6:7:8:9:10:11:12:13:14:15,64:64:64:64:64:64:64:128:128:128:128:128:128:128,global",
        "em_drop":0.2,
        "embedding_dim":64,
        "fc_config":"64,0.2",
        "optim_config":"adam,0.001",
        "bio_dnn_config":"256,0.2",
        "rnn_bidirectional":null,
        "rnn_config":null,
        "biofeats":"yes",
        "protein_seq_feats":"yes"
    }
}