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Cmake error after pulling repo #189

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rlober opened this issue May 5, 2015 · 10 comments
Closed

Cmake error after pulling repo #189

rlober opened this issue May 5, 2015 · 10 comments

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@rlober
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rlober commented May 5, 2015

Hey guys @francesco-romano @traversaro,

I was doing my bi-weekly update of the icub repos and after I pulled gazebo-yarp-plugins and tried running cmake .. from my build dir I get the following output/error:

ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins/build$ cmake ..
-- Boost version: 1.46.1
-- Found PROTOBUF: /usr/lib/libprotobuf.so  
-- Looking for OGRE...
-- OGRE_PREFIX_WATCH changed.
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.26") 
-- checking for module 'OGRE'
--   found OGRE, version 1.7.4
-- Found Ogre Cthugha (1.7.4)
-- Found OGRE: optimized;/usr/lib/x86_64-linux-gnu/libOgreMain.so;debug;/usr/lib/x86_64-linux-gnu/libOgreMain.so
-- Looking for OGRE_Paging...
-- Found OGRE_Paging: optimized;/usr/lib/x86_64-linux-gnu/libOgrePaging.so;debug;/usr/lib/x86_64-linux-gnu/libOgrePaging.so
-- Looking for OGRE_Terrain...
-- Found OGRE_Terrain: optimized;/usr/lib/x86_64-linux-gnu/libOgreTerrain.so;debug;/usr/lib/x86_64-linux-gnu/libOgreTerrain.so
-- Looking for OGRE_Property...
-- Found OGRE_Property: optimized;/usr/lib/x86_64-linux-gnu/libOgreProperty.so;debug;/usr/lib/x86_64-linux-gnu/libOgreProperty.so
-- Looking for OGRE_RTShaderSystem...
-- Found OGRE_RTShaderSystem: optimized;/usr/lib/x86_64-linux-gnu/libOgreRTShaderSystem.so;debug;/usr/lib/x86_64-linux-gnu/libOgreRTShaderSystem.so
-- Boost version: 1.46.1
-- Found the following Boost libraries:
--   serialization
--   system
-- Looking for OGRE...
-- Found Ogre Cthugha (1.7.4)
-- Looking for OGRE_Paging...
-- Looking for OGRE_Terrain...
-- Looking for OGRE_Property...
-- Looking for OGRE_RTShaderSystem...
-- checking for module 'gazebo'
--   found gazebo, version 4.1.1
-- checking for module 'sdformat'
--   found sdformat, version 2.2.0
-- checking for module 'protobuf'
--   found protobuf, version 2.4.1
-- Not processing thrift file clock_rpc.thrift, ALLOW_IDL_GENERATION=OFF
terminate called after throwing an instance of 'std::out_of_range'
  what():  basic_string::substr
Aborted (core dumped)

Ryan
@traversaro
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O_o
CMake version? Have you tried erasing the old build directory?

@rlober
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rlober commented May 5, 2015 

ryan@ISIR2014057:$ cmake --version
cmake version 2.8.11.2

and Yes, I did erase the old build and start from scratch. When I try run cmake .. or ccmake ..` I get the same errors.

@traversaro
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I guess it is on Ubuntu 12.04 . I will try to find a 12.04 box to replicate.

@rlober
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rlober commented May 5, 2015

Thanks man.

@rlober
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rlober commented May 5, 2015

Just an update...

I checked out a previous commit 0c4fa62 and this fixed the problem.

@traversaro
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Mhh.. two things.
Can you checkout the current master, after PR #190 and try?
If it is still not working, can you try post the output of the following commands:

which cmake
ldd `which cmake`
which pkg-config 
ldd `which pkg-config`

@rlober
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rlober commented May 5, 2015

Still not working... all the ouput is below:

ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins$ git checkout master
Previous HEAD position was 0c4fa62... Reverted travis.xml
Switched to branch 'master'
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins$ git pull
remote: Counting objects: 1, done.
remote: Total 1 (delta 0), reused 0 (delta 0), pack-reused 0
Unpacking objects: 100% (1/1), done.
From https://github.com/robotology/gazebo-yarp-plugins
   fca8ce2..6bdb463  master     -> origin/master
Updating fca8ce2..6bdb463
Fast-forward
 CMakeLists.txt                                  |   16 +++++++---------
 plugins/controlboard/src/ControlBoardDriver.cpp |    4 ++++
 2 files changed, 11 insertions(+), 9 deletions(-)
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins$ rm -rf build/
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins$ mkdir build
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins$ cd build/
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins/build$ cmake ..
-- The C compiler identification is GNU 4.6.3
-- The CXX compiler identification is GNU 4.6.3
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Boost version: 1.46.1
-- Found the following Boost libraries:
--   serialization
--   system
-- Found PROTOBUF: /usr/lib/libprotobuf.so  
-- Looking for OGRE...
-- OGRE_PREFIX_WATCH changed.
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.26") 
-- checking for module 'OGRE'
--   found OGRE, version 1.7.4
-- Found Ogre Cthugha (1.7.4)
-- Found OGRE: optimized;/usr/lib/x86_64-linux-gnu/libOgreMain.so;debug;/usr/lib/x86_64-linux-gnu/libOgreMain.so
-- Looking for OGRE_Paging...
-- Found OGRE_Paging: optimized;/usr/lib/x86_64-linux-gnu/libOgrePaging.so;debug;/usr/lib/x86_64-linux-gnu/libOgrePaging.so
-- Looking for OGRE_Terrain...
-- Found OGRE_Terrain: optimized;/usr/lib/x86_64-linux-gnu/libOgreTerrain.so;debug;/usr/lib/x86_64-linux-gnu/libOgreTerrain.so
-- Looking for OGRE_Property...
-- Found OGRE_Property: optimized;/usr/lib/x86_64-linux-gnu/libOgreProperty.so;debug;/usr/lib/x86_64-linux-gnu/libOgreProperty.so
-- Looking for OGRE_RTShaderSystem...
-- Found OGRE_RTShaderSystem: optimized;/usr/lib/x86_64-linux-gnu/libOgreRTShaderSystem.so;debug;/usr/lib/x86_64-linux-gnu/libOgreRTShaderSystem.so
-- Looking for OGRE_Paging...
-- Looking for OGRE_Terrain...
-- Looking for OGRE_Property...
-- Looking for OGRE_RTShaderSystem...
-- Not processing thrift file clock_rpc.thrift, ALLOW_IDL_GENERATION=OFF
terminate called after throwing an instance of 'std::out_of_range'
  what():  basic_string::substr
Aborted (core dumped)
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins/build$ which cmake
/usr/bin/cmake
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins/build$ ldd `which cmake`
    linux-vdso.so.1 =>  (0x00007fffa877c000)
    libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007ff344cf9000)
    libz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007ff344ae1000)
    libarchive.so.12 => /usr/lib/x86_64-linux-gnu/libarchive.so.12 (0x00007ff344857000)
    libcurl.so.4 => /usr/lib/x86_64-linux-gnu/libcurl.so.4 (0x00007ff3445fa000)
    libstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007ff3442f9000)
    libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007ff3440e3000)
    libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007ff343d24000)
    libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007ff343b06000)
    /lib64/ld-linux-x86-64.so.2 (0x00007ff344f30000)
    libacl.so.1 => /lib/x86_64-linux-gnu/libacl.so.1 (0x00007ff3438fe000)
    libattr.so.1 => /lib/x86_64-linux-gnu/libattr.so.1 (0x00007ff3436f9000)
    liblzma.so.5 => /usr/lib/x86_64-linux-gnu/liblzma.so.5 (0x00007ff3434d6000)
    libbz2.so.1.0 => /lib/x86_64-linux-gnu/libbz2.so.1.0 (0x00007ff3432c6000)
    libxml2.so.2 => /usr/lib/x86_64-linux-gnu/libxml2.so.2 (0x00007ff342f6a000)
    libnettle.so.4 => /usr/lib/x86_64-linux-gnu/libnettle.so.4 (0x00007ff342d43000)
    libidn.so.11 => /usr/lib/x86_64-linux-gnu/libidn.so.11 (0x00007ff342b10000)
    liblber-2.4.so.2 => /usr/lib/x86_64-linux-gnu/liblber-2.4.so.2 (0x00007ff342902000)
    libldap_r-2.4.so.2 => /usr/lib/x86_64-linux-gnu/libldap_r-2.4.so.2 (0x00007ff3426b2000)
    librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007ff3424aa000)
    libgssapi_krb5.so.2 => /usr/lib/x86_64-linux-gnu/libgssapi_krb5.so.2 (0x00007ff34226c000)
    libssl.so.1.0.0 => /lib/x86_64-linux-gnu/libssl.so.1.0.0 (0x00007ff34200d000)
    libcrypto.so.1.0.0 => /lib/x86_64-linux-gnu/libcrypto.so.1.0.0 (0x00007ff341c32000)
    librtmp.so.0 => /usr/lib/x86_64-linux-gnu/librtmp.so.0 (0x00007ff341a18000)
    libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007ff34171b000)
    libresolv.so.2 => /lib/x86_64-linux-gnu/libresolv.so.2 (0x00007ff3414ff000)
    libsasl2.so.2 => /usr/lib/x86_64-linux-gnu/libsasl2.so.2 (0x00007ff3412e3000)
    libgssapi.so.3 => /usr/lib/x86_64-linux-gnu/libgssapi.so.3 (0x00007ff3410a5000)
    libgnutls.so.26 => /usr/lib/x86_64-linux-gnu/libgnutls.so.26 (0x00007ff340de9000)
    libgcrypt.so.11 => /lib/x86_64-linux-gnu/libgcrypt.so.11 (0x00007ff340b69000)
    libkrb5.so.3 => /usr/lib/x86_64-linux-gnu/libkrb5.so.3 (0x00007ff34089b000)
    libk5crypto.so.3 => /usr/lib/x86_64-linux-gnu/libk5crypto.so.3 (0x00007ff340673000)
    libcom_err.so.2 => /lib/x86_64-linux-gnu/libcom_err.so.2 (0x00007ff34046e000)
    libkrb5support.so.0 => /usr/lib/x86_64-linux-gnu/libkrb5support.so.0 (0x00007ff340266000)
    libheimntlm.so.0 => /usr/lib/x86_64-linux-gnu/libheimntlm.so.0 (0x00007ff34005e000)
    libkrb5.so.26 => /usr/lib/x86_64-linux-gnu/libkrb5.so.26 (0x00007ff33fdd8000)
    libasn1.so.8 => /usr/lib/x86_64-linux-gnu/libasn1.so.8 (0x00007ff33fb38000)
    libhcrypto.so.4 => /usr/lib/x86_64-linux-gnu/libhcrypto.so.4 (0x00007ff33f903000)
    libroken.so.18 => /usr/lib/x86_64-linux-gnu/libroken.so.18 (0x00007ff33f6ee000)
    libtasn1.so.3 => /usr/lib/x86_64-linux-gnu/libtasn1.so.3 (0x00007ff33f4dd000)
    libp11-kit.so.0 => /usr/lib/x86_64-linux-gnu/libp11-kit.so.0 (0x00007ff33f2ca000)
    libgpg-error.so.0 => /lib/x86_64-linux-gnu/libgpg-error.so.0 (0x00007ff33f0c6000)
    libkeyutils.so.1 => /lib/x86_64-linux-gnu/libkeyutils.so.1 (0x00007ff33eec2000)
    libwind.so.0 => /usr/lib/x86_64-linux-gnu/libwind.so.0 (0x00007ff33ec98000)
    libheimbase.so.1 => /usr/lib/x86_64-linux-gnu/libheimbase.so.1 (0x00007ff33ea89000)
    libhx509.so.5 => /usr/lib/x86_64-linux-gnu/libhx509.so.5 (0x00007ff33e83f000)
    libsqlite3.so.0 => /usr/lib/x86_64-linux-gnu/libsqlite3.so.0 (0x00007ff33e59b000)
    libcrypt.so.1 => /lib/x86_64-linux-gnu/libcrypt.so.1 (0x00007ff33e362000)
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins/build$ which pkg-config
/usr/bin/pkg-config
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins/build$ ldd `which pkg-config`
    linux-vdso.so.1 =>  (0x00007fffc3110000)
    libglib-2.0.so.0 => /lib/x86_64-linux-gnu/libglib-2.0.so.0 (0x00007f7ea6349000)
    libpopt.so.0 => /lib/x86_64-linux-gnu/libpopt.so.0 (0x00007f7ea613c000)
    libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f7ea5d7d000)
    libpcre.so.3 => /lib/x86_64-linux-gnu/libpcre.so.3 (0x00007f7ea5b40000)
    libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f7ea5922000)
    librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007f7ea571a000)
    /lib64/ld-linux-x86-64.so.2 (0x00007f7ea6671000)
ryan@ISIR2014057:~/Code/iCub_Software/gazebo-yarp-plugins/build$

@traversaro
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Mh... we were able to replicate. For the meanwhile, can you disable the kalakris ppa that you use for CMake 2.8.11 and get instead CMake 2.8.12 from the robotology ppa https://launchpad.net/%7Erobotology/+archive/ubuntu/ppa , as suggested in https://github.com/robotology/codyco-superbuild/#system-dependencies-2 ?

@francesco-romano
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Hi @rlober
Can you try after 9c12ed9 ?

@rlober
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rlober commented May 5, 2015

@francesco-romano
Worked like a charm! Thanks guys!

👍

@rlober rlober closed this as completed May 5, 2015
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@traversaro @francesco-romano @rlober