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Add support for read splitting tags #199

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rhpvorderman opened this issue Oct 9, 2024 · 0 comments

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rhpvorderman commented Oct 9, 2024

See https://github.com/nanoporetech/dorado/blob/release-v0.8/documentation/SAM.md#split-read-tags

pi:Z contains the parent read id the subread was generated from.

This can be used to count the number of split reads and to get the number of chimeras.

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