main.tex

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% OXFORD THESIS TEMPLATE
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% Page layout
 %\documentclass[a4paper]{dphilthesis}
\documentclass[a4paper,twoside]{dphilthesis}
% \documentclass[a4paper,nobind]{dphilthesis}



% \includeonly{frontmatter}
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% Thesis information
\title{Rare and low-frequency variants and \\ predisposition to complex disease}
\unicrest{./img/oxford-crest}
\author{%
\Link{Patrick K. Albers}{mailto:pkalbers@gmail.com}%
}
\institute{%
\Link{Wellcome Trust Centre for Human Genetics}{http://www.well.ox.ac.uk} \\%
\Link{Big Data Institute}{http://www.bdi.ox.ac.uk} \\%
\Link{Medical Sciences Division}{http://www.medsci.ox.ac.uk}%
}
\college{%
\Link{Green Templeton College}{http://www.gtc.ox.ac.uk}%
}
\university{%
\Link{University of Oxford}{http://www.ox.ac.uk}%
}
\supervisor{Supervised by \\[0.75ex] Professor Gil McVean \\[0.5ex] Professor Mark McCarthy}
\degree{Doctor of Philosophy (DPhil)}
\degreedate{Hilary 2017}
\submitted{Submitted in Partial Fulfilment of the Requirements for the Degree of}

\hypersetup{pdfinfo={%
Title={Rare and low-frequency variants and predisposition to complex disease (University of Oxford; DPhil, PhD thesis)},%
Author={Patrick K. Albers}%
}}


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\let\l@table\l@figure
\makeatother


% Draft note
%\draftnote{Patrick K. Albers, thesis draft, \today}


% Abbreviations
\input{abbreviations}


% Document begin
\begin{document}


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\include{frontmatter}
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% Separate abstract
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%\input{sections/abstract}
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\include{chapter1/one}
\include{chapter2/two}
\include{chapter3/three}
\include{chapter4/four}
\include{chapter5/five}
\include{chapter6/six}


\newpage
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% Abbreviations

\cleardoublepage

\topquote[7cm]{%
\vspace*{-8mm}
The key test for an acronym is to ask whether \\
it helps or hurts communication.%
}{Elon Musk}

{%
\footnotesize%
\setstretch{1.075}%
\printglossary[type=\acronymtype,title=Abbreviations]%
}




% References

\cleardoublepage

\topquote[6cm]{%
\vspace*{-8mm}
My definition of a scientist is that you \\
can complete the following sentence:\\
`he or she has shown that \dots'%
}{E. O. Wilson}

\bibliographystyle{biblio}
{%
	\singlespacing%
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	\bibliography{library,manual}%
}






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\vspace*{-14ex}
\begin{flushleft}
\singlespacing
\footnotesize
\textsl{%
Remember kids, the only difference between \\
screwing around and science \\
is writing it down.} \\
\hspace{4cm}--- Adam Savage
\end{flushleft}

\vspace*{2ex}

\begin{flushleft}
\includegraphics[width=\textwidth]{./img/stat_wordcount}
\vspace*{-5ex}
\small\singlespacing\textbf{Supplementary Figure 1:} Word count over time during thesis writing period. Shown for the time since I automatically generated daily backups and until the submission of this thesis.
\end{flushleft}

\vspace*{2ex}

\begin{flushleft}
\includegraphics[width=\textwidth]{./img/stat_charrate}
\vspace*{-5ex}
\small\singlespacing\textbf{Supplementary Figure 2:} Number of characters written per day. Note that all characters in each \LaTeX~file were counted.
\end{flushleft}

\vspace*{2ex}

\begin{flushleft}
\includegraphics[width=\textwidth]{./img/stat_clusterload}
\vspace*{-5ex}
\small\singlespacing\textbf{Supplementary Figure 3:} Computer cluster usage one month before the submission date of this thesis. Indicated by \textbf{(A)} the number of nodes used and \textbf{(B)} the daily maximum of computer memory usage on the cluster of the Wellcome Trust Centre for Human Genetics.
\end{flushleft}


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\end{document}