From a5c8097b288c1a56793828e3ce166a5b74beb51e Mon Sep 17 00:00:00 2001 From: Richard Pearson Date: Thu, 25 Jun 2015 12:31:50 +0100 Subject: [PATCH] bug fix for error when specifying stop in fromvcf --- .gitignore | 1 + petlx/bio/vcf.py | 2 +- 2 files changed, 2 insertions(+), 1 deletion(-) diff --git a/.gitignore b/.gitignore index 9ab2990..5c15108 100755 --- a/.gitignore +++ b/.gitignore @@ -9,3 +9,4 @@ dist .idea tmp .tox/ +.DS_Store diff --git a/petlx/bio/vcf.py b/petlx/bio/vcf.py index 5f18a39..cead4f5 100644 --- a/petlx/bio/vcf.py +++ b/petlx/bio/vcf.py @@ -69,7 +69,7 @@ def __iter__(self): # fetch region? if None not in [self.chrom, self.start]: - it = reader.fetch(self.chrom, self.start, self.end) + it = reader.fetch(self.chrom, self.start, self.stop) else: it = reader