COMPAT: fix some warnings with numpy 1.11 with pytables

closes #12792

Author: jreback

pandas/io/pytables.py

@@ -1475,10 +1475,10 @@ def infer(self, handler):
 
     def convert(self, values, nan_rep, encoding):
         """ set the values from this selection: take = take ownership """
-        try:
+
+        # values is a recarray
+        if values.dtype.fields is not None:
             values = values[self.cname]
-        except:
-            pass
 
         values = _maybe_convert(values, self.kind, encoding)
 
@@ -2001,10 +2001,10 @@ def convert(self, values, nan_rep, encoding):
         if we can)
         """
 
-        try:
+        # values is a recarray
+        if values.dtype.fields is not None:
             values = values[self.cname]
-        except:
-            pass
+
         self.set_data(values)
 
         # use the meta if needed
@@ -4057,7 +4057,7 @@ def read(self, where=None, columns=None, **kwargs):
         if len(frames) == 1:
             df = frames[0]
         else:
-            df = concat(frames, axis=1, verify_integrity=False).consolidate()
+            df = concat(frames, axis=1)
 
         # apply the selection filters & axis orderings
         df = self.process_axes(df, columns=columns)

pandas/io/tests/test_pytables.py

@@ -3001,8 +3001,8 @@ def test_sparse_with_compression(self):
         # GH 2931
 
         # make sparse dataframe
-        df = DataFrame(np.random.binomial(
-            n=1, p=.01, size=(1e3, 10))).to_sparse(fill_value=0)
+        arr = np.random.binomial(n=1, p=.01, size=(1000, 10))
+        df = DataFrame(arr).to_sparse(fill_value=0)
 
         # case 1: store uncompressed
         self._check_double_roundtrip(df, tm.assert_frame_equal,
@@ -3015,7 +3015,7 @@ def test_sparse_with_compression(self):
                                      check_frame_type=True)
 
         # set one series to be completely sparse
-        df[0] = np.zeros(1e3)
+        df[0] = np.zeros(1000)
 
         # case 3: store df with completely sparse series uncompressed
         self._check_double_roundtrip(df, tm.assert_frame_equal,