diff --git a/flake.lock b/flake.lock
index 1807fb98ae..f1173fbabb 100644
--- a/flake.lock
+++ b/flake.lock
@@ -66,11 +66,11 @@
     },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1749903597,
-        "narHash": "sha256-jp0D4vzBcRKwNZwfY4BcWHemLGUs4JrS3X9w5k/JYDA=",
+        "lastModified": 1750122687,
+        "narHash": "sha256-zcGClfkXh4pckf4aGOZ18GFv73n1xHbdMWl17cPLouE=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "41da1e3ea8e23e094e5e3eeb1e6b830468a7399e",
+        "rev": "c539ae8d21e49776966d714f82fba33b1fca78bc",
         "type": "github"
       },
       "original": {
diff --git a/flake/dev/flake.lock b/flake/dev/flake.lock
index 14500981a6..be85d10984 100644
--- a/flake/dev/flake.lock
+++ b/flake/dev/flake.lock
@@ -2,11 +2,11 @@
   "nodes": {
     "dev-nixpkgs": {
       "locked": {
-        "lastModified": 1749903597,
-        "narHash": "sha256-jp0D4vzBcRKwNZwfY4BcWHemLGUs4JrS3X9w5k/JYDA=",
+        "lastModified": 1750122687,
+        "narHash": "sha256-zcGClfkXh4pckf4aGOZ18GFv73n1xHbdMWl17cPLouE=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "41da1e3ea8e23e094e5e3eeb1e6b830468a7399e",
+        "rev": "c539ae8d21e49776966d714f82fba33b1fca78bc",
         "type": "github"
       },
       "original": {
diff --git a/tests/lsp-servers.nix b/tests/lsp-servers.nix
index ae238d4c97..53456f2b50 100644
--- a/tests/lsp-servers.nix
+++ b/tests/lsp-servers.nix
@@ -45,14 +45,16 @@ let
           "ruff_lsp"
           "bufls"
           "typst_lsp"
+
+          # `vectorcode` fails its python dependency check, as the required dependency is dropped.
+          # See https://github.com/NixOS/nixpkgs/issues/415770
+          # and https://github.com/NixOS/nixpkgs/pull/416834#discussion_r2153315104
+          "vectorcode_server"
         ]
         ++ lib.optionals (hostPlatform.isLinux && hostPlatform.isAarch64) [
           # TODO: 2025-04-20 build failure (swift-corelibs-xctest)
           "sourcekit"
 
-          # pkgs.vectorcode is not available on this platform
-          "vectorcode_server"
-
           # TODO: 2024-10-05 build failure
           "fstar"
 
diff --git a/version-info.toml b/version-info.toml
index 5e60d437ff..bc448cff5c 100644
--- a/version-info.toml
+++ b/version-info.toml
@@ -1,6 +1,6 @@
 # DO NOT MODIFY!
 # This file was generated by ci/version-info/default.nix
-nixpkgs_rev = "41da1e3ea8e23e094e5e3eeb1e6b830468a7399e"
+nixpkgs_rev = "c539ae8d21e49776966d714f82fba33b1fca78bc"
 release = "25.11"
 unstable = true