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Multiworm

Travis CI Codecov.io PyPI

Reads data from the Multi-Worm Tracker program by the Kerr Lab (Swierczek) and exposes it in a clean, easy-to-use interface. Used by WALDO (source), a data-cleaner for the MWT developed by the Amaral Lab (Winter).

References

  • NA Swierczek, AC Giles, CH Rankin, RA Kerr. (2011) "High-throughput behavioral analysis in C. elegans" Nature Methods http://dx.doi.org/10.1038/nmeth.1625
  • P Winter, RM Brielmann, N Timkovich, HT Navarro, A Teixeira-Castro, R Morimoto, LAN Amaral (accepted, pending publication) "A network approach to discerning the identities of C. elegans in a free moving population" Scientific Reports http://dx.doi.org/10.1038/srep34895