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We have a root level Dockerfile in the tools repo which automatically builds at Docker Hub but it's the nfcore/base one that is used as a base for pipeline images: https://hub.docker.com/repository/docker/nfcore/base
It would be good to also write a Dockerfile that builds the nf-core/tools package into an image that people can use (yes I know, it should be on BioContainers too, but doing docker run nfcore/tools is nicer).
Build a Dockerfile for tools which has as small a footprint as possible
Organise Dockerfiles into directories so we can have both base and tools
Remove DockerHub automated builds
Write GitHub Actions builds + push to DockerHub
Write some documentation
The text was updated successfully, but these errors were encountered:
Yup, I was also wondering about just not using conda. I build the MultiQC image using pip and it's pretty small I think. Maybe also using multistage builds?
Also need to install Nextflow into this image and check around for any other dependencies.. 🤔
We have a root level
Dockerfile
in the tools repo which automatically builds at Docker Hub but it's thenfcore/base
one that is used as a base for pipeline images: https://hub.docker.com/repository/docker/nfcore/baseIt would be good to also write a Dockerfile that builds the nf-core/tools package into an image that people can use (yes I know, it should be on BioContainers too, but doing
docker run nfcore/tools
is nicer).Dockerfile
for tools which has as small a footprint as possibleDockerfiles
into directories so we can have both base and toolsThe text was updated successfully, but these errors were encountered: