diff --git a/CHANGELOG.md b/CHANGELOG.md
index a4394542..5808266d 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,18 +3,6 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
-## v3.0.2 - [date]
-
-### Added
-
-### Changed
-
-### Fixed
-
-- fix VCF_COLLECT handling when a tool is absent from FUSIONREPORT report
-
-### Removed
-
## v3.0.1 - [2023-11-29]
### Added
diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml
index 5930000d..dd83ce70 100644
--- a/assets/multiqc_config.yml
+++ b/assets/multiqc_config.yml
@@ -1,7 +1,7 @@
report_comment: >
- This report has been generated by the nf-core/rnafusion
+ This report has been generated by the nf-core/rnafusion
analysis pipeline. For information about how to interpret these results, please see the
- documentation.
+ documentation.
report_section_order:
nf-core-rnafusion-methods-description:
diff --git a/bin/vcf_collect.py b/bin/vcf_collect.py
index 2c25574f..a8ab85f4 100755
--- a/bin/vcf_collect.py
+++ b/bin/vcf_collect.py
@@ -346,11 +346,8 @@ def read_build_fusionreport(fusionreport_file: str) -> pd.DataFrame:
def read_fusionreport_csv(file: str) -> pd.DataFrame:
df = pd.read_csv(file)
- columns_to_iterate = ["starfusion", "arriba", "fusioncatcher"]
- for column in columns_to_iterate:
- if column not in df.columns:
- df[column] = ""
df[["starfusion", "arriba", "fusioncatcher"]] = df[["starfusion", "arriba", "fusioncatcher"]].astype("str")
+ columns_to_iterate = ["starfusion", "arriba", "fusioncatcher"]
for index, row in df.iterrows():
for column in columns_to_iterate:
cell_value = row[column]
diff --git a/nextflow.config b/nextflow.config
index b25aa1e3..3a54be0c 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -290,7 +290,7 @@ manifest {
description = """Nextflow rnafusion analysis pipeline, part of the nf-core community."""
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
- version = '3.0.2dev'
+ version = '3.0.1'
doi = ''
}