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Add option to restrict analysis to specific contigs #644

Merged
merged 11 commits into from
Nov 11, 2024
Merged

Add option to restrict analysis to specific contigs #644

merged 11 commits into from
Nov 11, 2024

Commits on Nov 6, 2024

  1. add to bwa* workflow

    @ramprasadn
    ramprasadn committed Nov 6, 2024
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Commits on Nov 8, 2024

  1. add to sentieon

    @ramprasadn
    ramprasadn committed Nov 8, 2024
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  2. update changelog

    @ramprasadn
    ramprasadn committed Nov 8, 2024
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  3. add parameter to changelog

    @ramprasadn
    ramprasadn committed Nov 8, 2024
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  4. fix lint

    @ramprasadn
    ramprasadn committed Nov 8, 2024
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Commits on Nov 11, 2024

  1. Merge branch 'dev' into samtools_view

    @ramprasadn
    ramprasadn authored Nov 11, 2024
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  2. update usage

    @ramprasadn
    ramprasadn committed Nov 11, 2024
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  3. Merge branch 'samtools_view' of github.com:nf-core/raredisease into s… 

    …amtools_view
    @ramprasadn
    ramprasadn committed Nov 11, 2024
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  4. fix lint

    @ramprasadn
    ramprasadn committed Nov 11, 2024
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  5. Update subworkflows/local/alignment/align_bwa_bwamem2_bwameme.nf 

    Co-authored-by: Anders Jemt <[email protected]>
    @ramprasadn @jemten
    ramprasadn and jemten authored Nov 11, 2024
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  6. Update subworkflows/local/alignment/align_sentieon.nf 

    Co-authored-by: Anders Jemt <[email protected]>
    @ramprasadn @jemten
    ramprasadn and jemten authored Nov 11, 2024
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