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Update dupradar.r according to new MultiQC (>=v1.22) config values #5943

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Jul 11, 2024
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Update dupradar.r according to new MultiQC (>=v1.22) config values #5943

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15 changes: 4 additions & 11 deletions modules/nf-core/dupradar/templates/dupradar.r
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Original file line number Diff line number Diff line change
Expand Up @@ -88,7 +88,6 @@ line="#id: DupInt
# max: 100
# min: 0
# scale: 'RdYlGn-rev'
# format: '{:.2f}%'
Sample dupRadar_intercept"

write(line,file=paste0(output_prefix, "_dup_intercept_mqc.txt"),append=TRUE)
Expand All @@ -115,29 +114,23 @@ line="#id: dupradar
# This plot shows the general linear models - a summary of the gene duplication distributions. \"
#pconfig:
# title: 'DupRadar General Linear Model'
# xLog: True
# xlog: True
# xlab: 'expression (reads/kbp)'
# ylab: '% duplicate reads'
# ymax: 100
# ymin: 0
# tt_label: '<b>{point.x:.1f} reads/kbp</b>: {point.y:,.2f}% duplicates'
# xPlotLines:
# x_lines:
# - color: 'green'
# dashStyle: 'LongDash'
# dash: 'LongDash'
# label:
# style: {color: 'green'}
# text: '0.5 RPKM'
# verticalAlign: 'bottom'
# y: -65
# value: 0.5
# width: 1
# - color: 'red'
# dashStyle: 'LongDash'
# dash: 'LongDash'
# label:
# style: {color: 'red'}
# text: '1 read/bp'
# verticalAlign: 'bottom'
# y: -65
# value: 1000
# width: 1"

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