Having multiple tools with version breaks pipeline (muse/sump)

[famosab]

Have you checked the docs?

• nf-core website: troubleshooting
• nf-core modules documentation

Description of the bug

ERROR ~ while scanning a simple key
 in 'reader', line 4, column 1:
    Copyright (C) 2024 Genome Resear ... 
    ^
could not find expected ':'
 in 'reader', line 5, column 1:
    
    ^


 -- Check script './workflows/sarek/../../subworkflows/local/utils_nfcore_sarek_pipeline/../../nf-core/utils_nfcore_pipeline/main.nf' at line: 97 or see '.nextflow.log' file for more details
ERROR ~ Pipeline failed. Please refer to troubleshooting docs: https://nf-co.re/docs/usage/troubleshooting

 -- Check '.nextflow.log' file for details
-[nf-core/sarek] Pipeline completed with errors-

When removing the second half of the versions part everything works as expected.

Command used and terminal output

nextflow run . -profile test_full,docker --outdir ../test-sarek-muse -resume -dump-channels

Relevant files

modules/nf-core/muse/sump/main.nf

Offending part:

    cat <<-END_VERSIONS > versions.yml
    "${task.process}":
        MuSE: \$( MuSE --version | sed -e "s/MuSE, version //g" )
        bgzip: \$( bgzip --version | sed -e "s/bgzip (htslib) //g" )
    END_VERSIONS

System information

• Nextflow version 24.10.2
• Linux Workstation
• Executor: Local