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@@ -47,14 +47,6 @@ NEAT can integrate seamlessly with existing bioinformatics workflows, providing
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## Algorithmic Improvements and Methodological Changes
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# Tables
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## Algorithmic Improvements and Methodological Changes
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# Tables
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## Algorithmic Improvements and Methodological Changes
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### Table 1. Enhancements in Algorithmic Performance
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| # | Feature Name | Prior Implementation (v2.0) | Updated Implementation (v4.X) |
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| # | Feature Name | Prior Implementation (v2.0) | Updated Implementation (v4.X) |
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|---|-------------|------------------------------|--------------------------------|
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| 1 | **Automated Testing** | No formal testing framework | Implemented continuous integration with GitHub-based automated tests |
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| 2 | **Refactoring & Unit Testing** | Monolithic, unstructured codebase | Rewritten with testable, discrete functions |
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| 2 | **Refactored Unit Testing** | Monolithic, unstructured codebase | Rewritten with testable, discrete functions |
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| 3 | **Friendly Installation** | Not installable as a package | Fully modular and pip-installable via Poetry |
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| 4 | **Configuration Files** | Required explicit command-line flags | Introduced structured configuration files |
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