Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

FastQ quality #81

Open
ymatsumoto opened this issue Dec 9, 2019 · 0 comments
Open

FastQ quality #81

ymatsumoto opened this issue Dec 9, 2019 · 0 comments

Comments

@ymatsumoto
Copy link

Hi,

At rel6 data set many fastq reads show >30 quality score on average. However, Our basecall results using raw fast5 files showed approximately 13 quality score using guppy 3.4.1.

Why is the quality of fastq reads so high?

Thanks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@ymatsumoto