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Detection of RNA outliers Pipeline |
Go to the Counting tab and click on DatasetsF.R. Then, select the desired
analysis group.
It contains the number of introns and splice sites captured,
as well as two filtering plots.
Go to the FRASER tab and click on Datasets.R. Then, select the desired
analysis group.
It contains different plots like the steps towards finding the optimal encoding
dimension, the number of aberrantly spliced genes per sample,
heatmaps of the sample covariation before and after correction,
biological coefficient of variation; and results tables.
Splicing outliers are computed using FRASER (Mertes, Scheller et al., bioRxiv, 2019).