Visual Studio Code (1.83.1, attached-container, desktop)
Jupyter Extension Version: 2023.9.1102792234.
Python Extension Version: 2023.18.0.
Platform: linux (x64).
Workspace folder /data/projects/dschaub/anca-project, Home = /home/dschaub
19:40:48.431 [info] User belongs to experiment group 'NewJupyterSession'
19:40:48.860 [debug] Get Custom Env Variables, Class name = Kl (started execution), Arg 1: undefined, Arg 2: "RunPythonCode"
19:40:48.861 [info] Start refreshing Kernel Picker (1697917248861)
19:40:48.872 [info] Using Pylance
19:40:49.741 [debug] Finding Global Python KernelSpecs
19:40:49.742 [debug] Get Custom Env Variables, Class name = Kl, completed in 883ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode"
19:40:49.742 [debug] Jupyter Paths /kernels: 
19:40:49.742 [debug] Full interpreter list is length: 0, 
19:40:49.743 [debug] Kernel Spec <username> Paths, /usr/share/jupyter/kernels, /usr/local/share/jupyter/kernels, ~/.local/share/jupyter/kernels
19:40:49.764 [debug] Loading kernelspec from /usr/local/share/jupyter/kernels/ir/kernel.json 
19:40:49.764 [debug] Loading kernelspec from ~/.local/share/jupyter/kernels/sc-kernel/kernel.json 
19:40:49.836 [debug] creating new code watcher with matching document file:///data/projects/dschaub/anca-project/source/plotting.py
19:40:50.461 [debug] Python API env change detected, add => '/opt/conda/envs/scrna-env/bin/python'
19:40:50.464 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/scrna-env/bin/python
19:40:50.469 [debug] Full interpreter list is length: 1, /opt/conda/envs/scrna-env/bin/python:scrna-env:Conda:/opt/conda/envs/scrna-env/bin/python
19:40:50.470 [warn] No interpreter with path /opt/conda/envs/scrna-env/bin/python3.8 found in Python API, will convert Uri path to string as Id /opt/conda/envs/scrna-env/bin/python3.8
19:40:50.470 [debug] Getting activated env variables, Class name = za (started execution), Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "/opt/conda/envs/scrna-env/bin/python", Arg 3: undefined
19:40:50.470 [debug] Get Custom Env Variables, Class name = Kl (started execution), Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "RunPythonCode"
19:40:50.471 [debug] Get Custom Env Variables, Class name = Kl, completed in 1ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "RunPythonCode"
19:40:50.512 [debug] Loading kernelspec from /opt/conda/envs/scrna-env/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/scrna-env/bin/python
19:40:50.582 [debug] Kernel Specs found in interpreter /opt/conda/envs/scrna-env/bin/python are [{"specFile":"/opt/conda/envs/scrna-env/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/scrna-env/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0de130c1e934a396f4157ca845dc87bdcc70740c55c6f839b43292088312ed588","argv":["/opt/conda/envs/scrna-env/bin/python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"/opt/conda/envs/scrna-env/bin/python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/scrna-env/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:50.583 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0de130c1e934a396f4157ca845dc87bdcc70740c55c6f839b43292088312ed588', /opt/conda/envs/scrna-env/bin/python for interpreter /opt/conda/envs/scrna-env/bin/python and spec /opt/conda/envs/scrna-env/share/jupyter/kernels/python3/kernel.json
19:40:50.583 [debug] Kernels for interpreter /opt/conda/envs/scrna-env/bin/python are .jvsc74a57bd0de130c1e934a396f4157ca845dc87bdcc70740c55c6f839b43292088312ed588./opt/conda/envs/scrna-env/python./opt/conda/envs/scrna-env/python.-m#ipykernel_launcher
19:40:50.708 [debug] Python API env change detected, update => '/opt/conda/envs/scrna-env/bin/python3.8'
19:40:50.709 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/scrna-env/bin/python3.8
19:40:50.711 [debug] Full interpreter list is length: 1, /opt/conda/envs/scrna-env/bin/python3.8:scrna-env:Conda:/opt/conda/envs/scrna-env/bin/python3.8
19:40:50.711 [debug] Kernel Specs found in interpreter /opt/conda/envs/scrna-env/bin/python3.8 are [{"specFile":"/opt/conda/envs/scrna-env/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/scrna-env/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0de130c1e934a396f4157ca845dc87bdcc70740c55c6f839b43292088312ed588","argv":["/opt/conda/envs/scrna-env/bin/python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"/opt/conda/envs/scrna-env/bin/python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/scrna-env/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:50.715 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0de130c1e934a396f4157ca845dc87bdcc70740c55c6f839b43292088312ed588', /opt/conda/envs/scrna-env/bin/python for interpreter /opt/conda/envs/scrna-env/bin/python and spec /opt/conda/envs/scrna-env/share/jupyter/kernels/python3/kernel.json
19:40:50.715 [debug] Kernels for interpreter /opt/conda/envs/scrna-env/bin/python3.8 are .jvsc74a57bd0ecde64b2f8d87aaa3950f32ae28d6c46700798f70721de4f715efcafe4ad39ba./opt/conda/envs/scrna-env/bin/python3.8./opt/conda/envs/scrna-env/bin/python3.8.-m#ipykernel_launcher
19:40:56.777 [info] Start refreshing Interpreter Kernel Picker
19:40:57.251 [debug] Python API env change detected, add => '/opt/conda/bin/python'
19:40:57.363 [debug] Python API env change detected, update => '/opt/conda/bin/python'
19:40:57.373 [debug] Python API env change detected, add => '/opt/conda/envs/commot/bin/python'
19:40:57.431 [debug] Python API env change detected, update => '/opt/conda/bin/python'
19:40:57.435 [debug] Search for KernelSpecs in Interpreter /opt/conda/bin/python
19:40:57.449 [debug] Python API env change detected, update => '/opt/conda/envs/commot/bin/python'
19:40:57.459 [debug] Loading kernelspec from /opt/conda/share/jupyter/kernels/bash/kernel.json for /opt/conda/bin/python
19:40:57.459 [debug] Loading kernelspec from /opt/conda/share/jupyter/kernels/python3/kernel.json for /opt/conda/bin/python
19:40:57.468 [debug] Python API env change detected, add => '/opt/conda/envs/commot-new/bin/python'
19:40:57.519 [debug] Kernel Specs found in interpreter /opt/conda/bin/python are [{"specFile":"/opt/conda/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0d4d1e4263499bec80672ea0156c357c1ee493ec2b1c70f0acce89fc37c4a6abe","argv":["/opt/conda/bin/python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"/opt/conda/bin/python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}},{"specFile":"/opt/conda/share/jupyter/kernels/bash/kernel.json","interpreterPath":"/opt/conda/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExtForCustomKernelSpec","name":"pythonjvsc74a57bd0d4d1e4263499bec80672ea0156c357c1ee493ec2b1c70f0acce89fc37c4a6abe","argv":["/opt/conda/bin/python","-m","bash_kernel","-f","{connection_file}"],"language":"bash","executable":"/opt/conda/bin/python","display_name":"Bash","metadata":{"vscode":{"originalSpecFile":"/opt/conda/share/jupyter/kernels/bash/kernel.json","originalDisplayName":"Bash"}},"env":{"PS1":"$"}}]
19:40:57.519 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0d4d1e4263499bec80672ea0156c357c1ee493ec2b1c70f0acce89fc37c4a6abe', /opt/conda/bin/python for interpreter /opt/conda/bin/python and spec /opt/conda/share/jupyter/kernels/python3/kernel.json
19:40:57.520 [debug] Kernels for interpreter /opt/conda/bin/python are .jvsc74a57bd0d4d1e4263499bec80672ea0156c357c1ee493ec2b1c70f0acce89fc37c4a6abe#bash./opt/conda/python././opt/conda/bin/python#-m#bash_kernel#-f#{connection_file}, .jvsc74a57bd0d4d1e4263499bec80672ea0156c357c1ee493ec2b1c70f0acce89fc37c4a6abe./opt/conda/python./opt/conda/python.-m#ipykernel_launcher
19:40:57.527 [debug] Python API env change detected, update => '/opt/conda/envs/commot/bin/python'
19:40:57.531 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/commot/bin/python
19:40:57.539 [debug] Python API env change detected, update => '/opt/conda/envs/commot-new/bin/python'
19:40:57.570 [debug] Loading kernelspec from /opt/conda/envs/commot/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/commot/bin/python
19:40:57.650 [debug] Python API env change detected, add => '/opt/conda/envs/cpdb/bin/python'
19:40:57.737 [debug] Kernel Specs found in interpreter /opt/conda/envs/commot/bin/python are [{"specFile":"/opt/conda/envs/commot/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/commot/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0f00c921302f9bc8ba0ec640c7c2bce9b67f1aef56b57828ef53602d1a0e42776","argv":["/opt/conda/envs/commot/bin/python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"/opt/conda/envs/commot/bin/python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/commot/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:57.737 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0f00c921302f9bc8ba0ec640c7c2bce9b67f1aef56b57828ef53602d1a0e42776', /opt/conda/envs/commot/bin/python for interpreter /opt/conda/envs/commot/bin/python and spec /opt/conda/envs/commot/share/jupyter/kernels/python3/kernel.json
19:40:57.737 [debug] Kernels for interpreter /opt/conda/envs/commot/bin/python are .jvsc74a57bd0f00c921302f9bc8ba0ec640c7c2bce9b67f1aef56b57828ef53602d1a0e42776./opt/conda/envs/commot/python./opt/conda/envs/commot/python.-m#ipykernel_launcher
19:40:57.741 [debug] Python API env change detected, update => '/opt/conda/envs/cpdb/bin/python'
19:40:57.760 [debug] Python API env change detected, update => '/opt/conda/envs/commot-new/bin/python'
19:40:57.765 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/commot-new/bin/python
19:40:57.790 [debug] Loading kernelspec from /opt/conda/envs/commot-new/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/commot-new/bin/python
19:40:57.794 [debug] Python API env change detected, add => '/opt/conda/envs/d2c/bin/python'
19:40:57.834 [debug] Kernel Specs found in interpreter /opt/conda/envs/commot-new/bin/python are [{"specFile":"/opt/conda/envs/commot-new/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/commot-new/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0de34f4180567575a9c39fe3a4cd88564372490942ad9fb459f6a56c4a97256cb","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/commot-new/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:57.834 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0de34f4180567575a9c39fe3a4cd88564372490942ad9fb459f6a56c4a97256cb', /python for interpreter /opt/conda/envs/commot-new/bin/python and spec /opt/conda/envs/commot-new/share/jupyter/kernels/python3/kernel.json
19:40:57.834 [debug] Kernels for interpreter /opt/conda/envs/commot-new/bin/python are .jvsc74a57bd0de34f4180567575a9c39fe3a4cd88564372490942ad9fb459f6a56c4a97256cb./opt/conda/envs/commot-new/python./opt/conda/envs/commot-new/python.-m#ipykernel_launcher
19:40:57.839 [debug] Python API env change detected, update => '/opt/conda/envs/cpdb/bin/python'
19:40:57.845 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/cpdb/bin/python
19:40:57.858 [debug] Python API env change detected, update => '/opt/conda/envs/d2c/bin/python'
19:40:57.865 [debug] Loading kernelspec from /opt/conda/envs/cpdb/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/cpdb/bin/python
19:40:57.869 [debug] Python API env change detected, add => '/opt/conda/envs/img_exp/bin/python'
19:40:57.915 [debug] Kernel Specs found in interpreter /opt/conda/envs/cpdb/bin/python are [{"specFile":"/opt/conda/envs/cpdb/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/cpdb/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0757a288eedeb436be75983199c5c5e49a7ec77158d3168825eab505864f50fd7","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/cpdb/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:57.916 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0757a288eedeb436be75983199c5c5e49a7ec77158d3168825eab505864f50fd7', /python for interpreter /opt/conda/envs/cpdb/bin/python and spec /opt/conda/envs/cpdb/share/jupyter/kernels/python3/kernel.json
19:40:57.916 [debug] Kernels for interpreter /opt/conda/envs/cpdb/bin/python are .jvsc74a57bd0757a288eedeb436be75983199c5c5e49a7ec77158d3168825eab505864f50fd7./opt/conda/envs/cpdb/python./opt/conda/envs/cpdb/python.-m#ipykernel_launcher
19:40:57.924 [debug] Python API env change detected, update => '/opt/conda/envs/d2c/bin/python'
19:40:57.932 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/d2c/bin/python
19:40:57.941 [debug] Python API env change detected, update => '/opt/conda/envs/img_exp/bin/python'
19:40:57.956 [debug] Loading kernelspec from /opt/conda/envs/d2c/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/d2c/bin/python
19:40:57.959 [debug] Python API env change detected, add => '/opt/conda/envs/liana/bin/python'
19:40:58.017 [debug] Kernel Specs found in interpreter /opt/conda/envs/d2c/bin/python are [{"specFile":"/opt/conda/envs/d2c/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/d2c/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd01428bd691b4ba5bbf21aeec5e96020b588db21cd9667f2310763f7a3484f2abf","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/d2c/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:58.017 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd01428bd691b4ba5bbf21aeec5e96020b588db21cd9667f2310763f7a3484f2abf', /python for interpreter /opt/conda/envs/d2c/bin/python and spec /opt/conda/envs/d2c/share/jupyter/kernels/python3/kernel.json
19:40:58.017 [debug] Kernels for interpreter /opt/conda/envs/d2c/bin/python are .jvsc74a57bd01428bd691b4ba5bbf21aeec5e96020b588db21cd9667f2310763f7a3484f2abf./opt/conda/envs/d2c/python./opt/conda/envs/d2c/python.-m#ipykernel_launcher
19:40:58.033 [debug] Python API env change detected, update => '/opt/conda/envs/img_exp/bin/python'
19:40:58.041 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/img_exp/bin/python
19:40:58.044 [debug] No controller, hence notebook communications cannot be initialized for editor /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:40:58.055 [debug] Python API env change detected, update => '/opt/conda/envs/liana/bin/python'
19:40:58.075 [debug] Loading kernelspec from /opt/conda/envs/img_exp/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/img_exp/bin/python
19:40:58.081 [debug] Python API env change detected, add => '/opt/conda/envs/liana_new/bin/python'
19:40:58.134 [debug] Kernel Specs found in interpreter /opt/conda/envs/img_exp/bin/python are [{"specFile":"/opt/conda/envs/img_exp/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/img_exp/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd05c0cbae33c6526a50b0558dbe472fd621f635a2dd9a6171cb9d8aa45709deac1","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/img_exp/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:58.134 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd05c0cbae33c6526a50b0558dbe472fd621f635a2dd9a6171cb9d8aa45709deac1', /python for interpreter /opt/conda/envs/img_exp/bin/python and spec /opt/conda/envs/img_exp/share/jupyter/kernels/python3/kernel.json
19:40:58.134 [debug] Kernels for interpreter /opt/conda/envs/img_exp/bin/python are .jvsc74a57bd05c0cbae33c6526a50b0558dbe472fd621f635a2dd9a6171cb9d8aa45709deac1./opt/conda/envs/img_exp/python./opt/conda/envs/img_exp/python.-m#ipykernel_launcher
19:40:58.145 [debug] Python API env change detected, update => '/opt/conda/envs/liana/bin/python'
19:40:58.153 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/liana/bin/python
19:40:58.161 [debug] Python API env change detected, update => '/opt/conda/envs/liana_new/bin/python'
19:40:58.174 [debug] Loading kernelspec from /opt/conda/envs/liana/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/liana/bin/python
19:40:58.184 [debug] Kernel Specs found in interpreter /opt/conda/envs/liana/bin/python are [{"specFile":"/opt/conda/envs/liana/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/liana/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0ffd074b30b9277b750d65a2d865ee2a759839560bb6e0996b44020124af5f4fe","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/liana/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:58.184 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0ffd074b30b9277b750d65a2d865ee2a759839560bb6e0996b44020124af5f4fe', /python for interpreter /opt/conda/envs/liana/bin/python and spec /opt/conda/envs/liana/share/jupyter/kernels/python3/kernel.json
19:40:58.184 [debug] Kernels for interpreter /opt/conda/envs/liana/bin/python are .jvsc74a57bd0ffd074b30b9277b750d65a2d865ee2a759839560bb6e0996b44020124af5f4fe./opt/conda/envs/liana/python./opt/conda/envs/liana/python.-m#ipykernel_launcher
19:40:58.185 [debug] Python API env change detected, add => '/opt/conda/envs/ncem/bin/python'
19:40:58.699 [debug] Conda file returned by Python Extension is conda
19:40:58.745 [debug] Python API env change detected, update => '/opt/conda/envs/liana_new/bin/python'
19:40:58.755 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/liana_new/bin/python
19:40:58.775 [debug] Python API env change detected, update => '/opt/conda/envs/ncem/bin/python'
19:40:58.803 [debug] Loading kernelspec from /opt/conda/envs/liana_new/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/liana_new/bin/python
19:40:58.818 [debug] Python API env change detected, add => '/opt/conda/envs/py2r/bin/python'
19:40:58.869 [debug] Kernel Specs found in interpreter /opt/conda/envs/liana_new/bin/python are [{"specFile":"/opt/conda/envs/liana_new/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/liana_new/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd024ee7ec9c1a5e14e061c9dd986b53a5cd00e207a55c6281d85767fe45dae8272","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/liana_new/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:40:58.869 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd024ee7ec9c1a5e14e061c9dd986b53a5cd00e207a55c6281d85767fe45dae8272', /python for interpreter /opt/conda/envs/liana_new/bin/python and spec /opt/conda/envs/liana_new/share/jupyter/kernels/python3/kernel.json
19:40:58.869 [debug] Kernels for interpreter /opt/conda/envs/liana_new/bin/python are .jvsc74a57bd024ee7ec9c1a5e14e061c9dd986b53a5cd00e207a55c6281d85767fe45dae8272./opt/conda/envs/liana_new/python./opt/conda/envs/liana_new/python.-m#ipykernel_launcher
19:40:58.925 [debug] Python API env change detected, update => '/opt/conda/envs/py2r/bin/python'
19:41:00.023 [debug] Python API env change detected, update => '/opt/conda/envs/ncem/bin/python'
19:41:00.034 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/ncem/bin/python
19:41:00.107 [debug] Loading kernelspec from /opt/conda/envs/ncem/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/ncem/bin/python
19:41:00.146 [debug] Kernel Specs found in interpreter /opt/conda/envs/ncem/bin/python are [{"specFile":"/opt/conda/envs/ncem/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/ncem/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd06cc0b8dedceac6b791a92c08e6ab61bf331c4c3fb71bf74145988cdabaca724f","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/ncem/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:00.146 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd06cc0b8dedceac6b791a92c08e6ab61bf331c4c3fb71bf74145988cdabaca724f', /python for interpreter /opt/conda/envs/ncem/bin/python and spec /opt/conda/envs/ncem/share/jupyter/kernels/python3/kernel.json
19:41:00.147 [debug] Kernels for interpreter /opt/conda/envs/ncem/bin/python are .jvsc74a57bd06cc0b8dedceac6b791a92c08e6ab61bf331c4c3fb71bf74145988cdabaca724f./opt/conda/envs/ncem/python./opt/conda/envs/ncem/python.-m#ipykernel_launcher
19:41:00.149 [debug] Python API env change detected, update => '/opt/conda/envs/py2r/bin/python'
19:41:00.158 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/py2r/bin/python
19:41:00.161 [debug] Full interpreter list is length: 11, /opt/conda/envs/scrna-env/bin/python3.8:scrna-env:Conda:/opt/conda/envs/scrna-env/bin/python3.8, /opt/conda/bin/python:base:Conda:/opt/conda/bin/python, /opt/conda/envs/commot/bin/python:commot:Conda:/opt/conda/envs/commot/bin/python, /opt/conda/envs/commot-new/bin/python:commot-new:Conda:/opt/conda/envs/commot-new/bin/python, /opt/conda/envs/cpdb/bin/python:cpdb:Conda:/opt/conda/envs/cpdb/bin/python, /opt/conda/envs/d2c/bin/python:d2c:Conda:/opt/conda/envs/d2c/bin/python, /opt/conda/envs/img_exp/bin/python:img_exp:Conda:/opt/conda/envs/img_exp/bin/python, /opt/conda/envs/liana/bin/python:liana:Conda:/opt/conda/envs/liana/bin/python, /opt/conda/envs/liana_new/bin/python:liana_new:Conda:/opt/conda/envs/liana_new/bin/python, /opt/conda/envs/ncem/bin/python:ncem:Conda:/opt/conda/envs/ncem/bin/python, /opt/conda/envs/py2r/bin/python:py2r:Conda:/opt/conda/envs/py2r/bin/python
19:41:00.233 [debug] Loading kernelspec from /opt/conda/envs/py2r/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/py2r/bin/python
19:41:00.235 [debug] Python API env change detected, add => '/opt/conda/envs/scvi-env/bin/python'
19:41:00.311 [debug] Kernel Specs found in interpreter /opt/conda/envs/py2r/bin/python are [{"specFile":"/opt/conda/envs/py2r/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/py2r/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd09a622d3a1f481c459f9089025b3770e850256e81ddbf0db8f8b798373a0c6368","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/py2r/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:00.311 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd09a622d3a1f481c459f9089025b3770e850256e81ddbf0db8f8b798373a0c6368', /python for interpreter /opt/conda/envs/py2r/bin/python and spec /opt/conda/envs/py2r/share/jupyter/kernels/python3/kernel.json
19:41:00.311 [debug] Kernels for interpreter /opt/conda/envs/py2r/bin/python are .jvsc74a57bd09a622d3a1f481c459f9089025b3770e850256e81ddbf0db8f8b798373a0c6368./opt/conda/envs/py2r/python./opt/conda/envs/py2r/python.-m#ipykernel_launcher
19:41:00.324 [debug] Python API env change detected, add => '/opt/conda/envs/spatial_represent/bin/python'
19:41:00.389 [debug] Python API env change detected, update => '/opt/conda/envs/scvi-env/bin/python'
19:41:00.415 [debug] Python API env change detected, update => '/opt/conda/envs/spatial_represent/bin/python'
19:41:00.427 [debug] Python API env change detected, update => '/opt/conda/envs/scvi-env/bin/python'
19:41:00.438 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/scvi-env/bin/python
19:41:00.512 [debug] Loading kernelspec from /opt/conda/envs/scvi-env/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/scvi-env/bin/python
19:41:00.515 [debug] Python API env change detected, add => '/opt/conda/envs/spatialccc/bin/python'
19:41:00.589 [debug] Kernel Specs found in interpreter /opt/conda/envs/scvi-env/bin/python are [{"specFile":"/opt/conda/envs/scvi-env/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/scvi-env/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd","argv":["/opt/conda/envs/scvi-env/bin/python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"/opt/conda/envs/scvi-env/bin/python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/scvi-env/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:00.589 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd', /opt/conda/envs/scvi-env/bin/python for interpreter /opt/conda/envs/scvi-env/bin/python and spec /opt/conda/envs/scvi-env/share/jupyter/kernels/python3/kernel.json
19:41:00.589 [debug] Kernels for interpreter /opt/conda/envs/scvi-env/bin/python are .jvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd./opt/conda/envs/scvi-env/python./opt/conda/envs/scvi-env/python.-m#ipykernel_launcher
19:41:00.596 [debug] Python API env change detected, update => '/opt/conda/envs/spatial_represent/bin/python'
19:41:00.616 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/spatial_represent/bin/python
19:41:00.622 [debug] Python API env change detected, update => '/opt/conda/envs/spatialccc/bin/python'
19:41:00.654 [debug] Loading kernelspec from /opt/conda/envs/spatial_represent/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/spatial_represent/bin/python
19:41:00.657 [debug] Python API env change detected, add => '/opt/conda/envs/squidpy/bin/python'
19:41:00.732 [debug] Kernel Specs found in interpreter /opt/conda/envs/spatial_represent/bin/python are [{"specFile":"/opt/conda/envs/spatial_represent/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/spatial_represent/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0ba511553308eecc36ea8b1b979b2391e14cd1b7df6b46626174febd5caaa4562","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/spatial_represent/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:00.732 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0ba511553308eecc36ea8b1b979b2391e14cd1b7df6b46626174febd5caaa4562', /python for interpreter /opt/conda/envs/spatial_represent/bin/python and spec /opt/conda/envs/spatial_represent/share/jupyter/kernels/python3/kernel.json
19:41:00.732 [debug] Kernels for interpreter /opt/conda/envs/spatial_represent/bin/python are .jvsc74a57bd0ba511553308eecc36ea8b1b979b2391e14cd1b7df6b46626174febd5caaa4562./opt/conda/envs/spatial_represent/python./opt/conda/envs/spatial_represent/python.-m#ipykernel_launcher
19:41:00.738 [debug] Python API env change detected, update => '/opt/conda/envs/spatialccc/bin/python'
19:41:00.751 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/spatialccc/bin/python
19:41:00.761 [debug] Python API env change detected, update => '/opt/conda/envs/squidpy/bin/python'
19:41:00.789 [debug] Loading kernelspec from /opt/conda/envs/spatialccc/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/spatialccc/bin/python
19:41:00.797 [debug] Python API env change detected, add => '/opt/conda/envs/symphonypy/bin/python'
19:41:00.875 [debug] Kernel Specs found in interpreter /opt/conda/envs/spatialccc/bin/python are [{"specFile":"/opt/conda/envs/spatialccc/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/spatialccc/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd00a081dd148100e004f993df8463fb66cf2003d099240657ce4ffeda01a66f453","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/spatialccc/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:00.875 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd00a081dd148100e004f993df8463fb66cf2003d099240657ce4ffeda01a66f453', /python for interpreter /opt/conda/envs/spatialccc/bin/python and spec /opt/conda/envs/spatialccc/share/jupyter/kernels/python3/kernel.json
19:41:00.876 [debug] Kernels for interpreter /opt/conda/envs/spatialccc/bin/python are .jvsc74a57bd00a081dd148100e004f993df8463fb66cf2003d099240657ce4ffeda01a66f453./opt/conda/envs/spatialccc/python./opt/conda/envs/spatialccc/python.-m#ipykernel_launcher
19:41:00.919 [debug] Python API env change detected, update => '/opt/conda/envs/symphonypy/bin/python'
19:41:00.936 [debug] Python API env change detected, update => '/opt/conda/envs/squidpy/bin/python'
19:41:00.948 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/squidpy/bin/python
19:41:00.965 [debug] Loading kernelspec from /opt/conda/envs/squidpy/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/squidpy/bin/python
19:41:00.976 [debug] Python API env change detected, add => '/opt/conda/envs/tangram/bin/python'
19:41:01.055 [debug] Kernel Specs found in interpreter /opt/conda/envs/squidpy/bin/python are [{"specFile":"/opt/conda/envs/squidpy/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/squidpy/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd00e38d879c44d1b0f38b03351d54371d74042d0ab912ced7bc525527344be1b78","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/squidpy/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:01.056 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd00e38d879c44d1b0f38b03351d54371d74042d0ab912ced7bc525527344be1b78', /python for interpreter /opt/conda/envs/squidpy/bin/python and spec /opt/conda/envs/squidpy/share/jupyter/kernels/python3/kernel.json
19:41:01.056 [debug] Kernels for interpreter /opt/conda/envs/squidpy/bin/python are .jvsc74a57bd00e38d879c44d1b0f38b03351d54371d74042d0ab912ced7bc525527344be1b78./opt/conda/envs/squidpy/python./opt/conda/envs/squidpy/python.-m#ipykernel_launcher
19:41:01.085 [debug] Python API env change detected, update => '/opt/conda/envs/tangram/bin/python'
19:41:01.104 [debug] Python API env change detected, update => '/opt/conda/envs/symphonypy/bin/python'
19:41:01.118 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/symphonypy/bin/python
19:41:01.142 [debug] Loading kernelspec from /opt/conda/envs/symphonypy/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/symphonypy/bin/python
19:41:01.152 [debug] Python API env change detected, add => '/opt/conda/envs/vision/bin/python'
19:41:01.223 [debug] Kernel Specs found in interpreter /opt/conda/envs/symphonypy/bin/python are [{"specFile":"/opt/conda/envs/symphonypy/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/symphonypy/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0b2d3b286db9a7c45309108c76bbe4d96f651ee180512a1a7bde7ff283d6670b2","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/symphonypy/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:01.224 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0b2d3b286db9a7c45309108c76bbe4d96f651ee180512a1a7bde7ff283d6670b2', /python for interpreter /opt/conda/envs/symphonypy/bin/python and spec /opt/conda/envs/symphonypy/share/jupyter/kernels/python3/kernel.json
19:41:01.224 [debug] Kernels for interpreter /opt/conda/envs/symphonypy/bin/python are .jvsc74a57bd0b2d3b286db9a7c45309108c76bbe4d96f651ee180512a1a7bde7ff283d6670b2./opt/conda/envs/symphonypy/python./opt/conda/envs/symphonypy/python.-m#ipykernel_launcher
19:41:01.251 [debug] Python API env change detected, update => '/opt/conda/envs/vision/bin/python'
19:41:01.270 [debug] Python API env change detected, update => '/opt/conda/envs/tangram/bin/python'
19:41:01.289 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/tangram/bin/python
19:41:01.306 [debug] Loading kernelspec from /opt/conda/envs/tangram/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/tangram/bin/python
19:41:01.312 [debug] Kernel Specs found in interpreter /opt/conda/envs/tangram/bin/python are [{"specFile":"/opt/conda/envs/tangram/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/tangram/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd03fc71b3b3ff5122f468101838f348f8103038e11843bdfc95fd740411cd5901e","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/tangram/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:01.312 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd03fc71b3b3ff5122f468101838f348f8103038e11843bdfc95fd740411cd5901e', /python for interpreter /opt/conda/envs/tangram/bin/python and spec /opt/conda/envs/tangram/share/jupyter/kernels/python3/kernel.json
19:41:01.312 [debug] Kernels for interpreter /opt/conda/envs/tangram/bin/python are .jvsc74a57bd03fc71b3b3ff5122f468101838f348f8103038e11843bdfc95fd740411cd5901e./opt/conda/envs/tangram/python./opt/conda/envs/tangram/python.-m#ipykernel_launcher
19:41:01.316 [debug] Python API env change detected, update => '/opt/conda/envs/vision/bin/python'
19:41:01.334 [debug] Search for KernelSpecs in Interpreter /opt/conda/envs/vision/bin/python
19:41:01.337 [debug] Full interpreter list is length: 18, /opt/conda/envs/scrna-env/bin/python3.8:scrna-env:Conda:/opt/conda/envs/scrna-env/bin/python3.8, /opt/conda/bin/python:base:Conda:/opt/conda/bin/python, /opt/conda/envs/commot/bin/python:commot:Conda:/opt/conda/envs/commot/bin/python, /opt/conda/envs/commot-new/bin/python:commot-new:Conda:/opt/conda/envs/commot-new/bin/python, /opt/conda/envs/cpdb/bin/python:cpdb:Conda:/opt/conda/envs/cpdb/bin/python, /opt/conda/envs/d2c/bin/python:d2c:Conda:/opt/conda/envs/d2c/bin/python, /opt/conda/envs/img_exp/bin/python:img_exp:Conda:/opt/conda/envs/img_exp/bin/python, /opt/conda/envs/liana/bin/python:liana:Conda:/opt/conda/envs/liana/bin/python, /opt/conda/envs/liana_new/bin/python:liana_new:Conda:/opt/conda/envs/liana_new/bin/python, /opt/conda/envs/ncem/bin/python:ncem:Conda:/opt/conda/envs/ncem/bin/python, /opt/conda/envs/py2r/bin/python:py2r:Conda:/opt/conda/envs/py2r/bin/python, /opt/conda/envs/scvi-env/bin/python:scvi-env:Conda:/opt/conda/envs/scvi-env/bin/python, /opt/conda/envs/spatial_represent/bin/python:spatial_represent:Conda:/opt/conda/envs/spatial_represent/bin/python, /opt/conda/envs/spatialccc/bin/python:spatialccc:Conda:/opt/conda/envs/spatialccc/bin/python, /opt/conda/envs/squidpy/bin/python:squidpy:Conda:/opt/conda/envs/squidpy/bin/python, /opt/conda/envs/symphonypy/bin/python:symphonypy:Conda:/opt/conda/envs/symphonypy/bin/python, /opt/conda/envs/tangram/bin/python:tangram:Conda:/opt/conda/envs/tangram/bin/python, /opt/conda/envs/vision/bin/python:vision:Conda:/opt/conda/envs/vision/bin/python
19:41:01.357 [debug] Loading kernelspec from /opt/conda/envs/vision/share/jupyter/kernels/python3/kernel.json for /opt/conda/envs/vision/bin/python
19:41:01.358 [debug] Python API env change detected, add => '/bin/python2'
19:41:01.449 [debug] Kernel Specs found in interpreter /opt/conda/envs/vision/bin/python are [{"specFile":"/opt/conda/envs/vision/share/jupyter/kernels/python3/kernel.json","interpreterPath":"/opt/conda/envs/vision/bin/python","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd036d4aa8a4e68c56763773ba22dd640e0108bbea0d185bf2a6a2891fb2b3d4b82","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"/opt/conda/envs/vision/share/jupyter/kernels/python3/kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}]
19:41:01.449 [debug] Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd036d4aa8a4e68c56763773ba22dd640e0108bbea0d185bf2a6a2891fb2b3d4b82', /python for interpreter /opt/conda/envs/vision/bin/python and spec /opt/conda/envs/vision/share/jupyter/kernels/python3/kernel.json
19:41:01.449 [debug] Kernels for interpreter /opt/conda/envs/vision/bin/python are .jvsc74a57bd036d4aa8a4e68c56763773ba22dd640e0108bbea0d185bf2a6a2891fb2b3d4b82./opt/conda/envs/vision/python./opt/conda/envs/vision/python.-m#ipykernel_launcher
19:41:01.531 [debug] Python API env change detected, update => '/bin/python2'
19:41:01.559 [debug] Python API env change detected, add => '/bin/python3'
19:41:01.632 [debug] Python API env change detected, update => '/bin/python2'
19:41:01.653 [debug] Search for KernelSpecs in Interpreter /bin/python2
19:41:01.659 [debug] Python API env change detected, update => '/bin/python3'
19:41:01.681 [debug] Kernels for interpreter /bin/python2 are .jvsc74a57bd0e55666fbbf217aa3df372b978577f47b6009e2f78e2ec76a584f49cd54a1e62c./bin/python2./bin/python2.-m#ipykernel_launcher
19:41:01.723 [debug] Python API env change detected, add => '/usr/bin/python2'
19:41:01.815 [debug] Got env vars with python /opt/conda/envs/scrna-env/bin/python, with env var count 125 in 11345ms. 
    PATH value is /opt/conda/envs/scrna-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:01.815 [debug] Prepend PATH with python bin for /opt/conda/envs/scrna-env/bin/python, 
    PATH value is /opt/conda/envs/scrna-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:01.815 [debug] Activated Env Variables for /opt/conda/envs/scrna-env/bin/python, 
    PATH value is /opt/conda/envs/scrna-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:01.815 [debug] Getting activated env variables, Class name = za, completed in 11345ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "/opt/conda/envs/scrna-env/bin/python", Arg 3: undefined
19:41:01.875 [info] Process Execution: /opt/conda/envs/scrna-env/bin/python -m pip list
19:41:01.895 [debug] Python API env change detected, update => '/bin/python3'
19:41:01.912 [debug] Search for KernelSpecs in Interpreter /bin/python3
19:41:01.993 [debug] Kernels for interpreter /bin/python3 are .jvsc74a57bd0916dbcbb3f70747c44a77c7bcd40155683ae19c65e1c03b4aa3499c5328201f1./bin/python3./bin/python3.-m#ipykernel_launcher
19:41:02.014 [debug] Python API env change detected, update => '/usr/bin/python2'
19:41:02.053 [debug] Python API env change detected, add => '/usr/bin/python3'
19:41:02.138 [debug] Python API env change detected, update => '/usr/bin/python2'
19:41:02.155 [debug] Search for KernelSpecs in Interpreter /usr/bin/python2
19:41:02.163 [debug] Python API env change detected, update => '/usr/bin/python3'
19:41:02.187 [debug] Kernels for interpreter /usr/bin/python2 are .jvsc74a57bd0f92b2924b84ff19c1c3dc485f7644d4486f64738191026bf8e6de303969141b5./usr/bin/python2./usr/bin/python2.-m#ipykernel_launcher
19:41:02.198 [debug] Python API env change detected, update => '/opt/conda/bin/python'
19:41:02.200 [debug] Python API env change detected, update => '/bin/python2'
19:41:02.200 [debug] Python API env change detected, update => '/bin/python3'
19:41:02.201 [debug] Python API env change detected, update => '/usr/bin/python2'
19:41:02.243 [debug] Search for KernelSpecs in Interpreter /usr/bin/python3
19:41:02.246 [debug] Full interpreter list is length: 22, /opt/conda/envs/scrna-env/bin/python3.8:scrna-env:Conda:/opt/conda/envs/scrna-env/bin/python3.8, /opt/conda/bin/python:base:Conda:/opt/conda/bin/python, /opt/conda/envs/commot/bin/python:commot:Conda:/opt/conda/envs/commot/bin/python, /opt/conda/envs/commot-new/bin/python:commot-new:Conda:/opt/conda/envs/commot-new/bin/python, /opt/conda/envs/cpdb/bin/python:cpdb:Conda:/opt/conda/envs/cpdb/bin/python, /opt/conda/envs/d2c/bin/python:d2c:Conda:/opt/conda/envs/d2c/bin/python, /opt/conda/envs/img_exp/bin/python:img_exp:Conda:/opt/conda/envs/img_exp/bin/python, /opt/conda/envs/liana/bin/python:liana:Conda:/opt/conda/envs/liana/bin/python, /opt/conda/envs/liana_new/bin/python:liana_new:Conda:/opt/conda/envs/liana_new/bin/python, /opt/conda/envs/ncem/bin/python:ncem:Conda:/opt/conda/envs/ncem/bin/python, /opt/conda/envs/py2r/bin/python:py2r:Conda:/opt/conda/envs/py2r/bin/python, /opt/conda/envs/scvi-env/bin/python:scvi-env:Conda:/opt/conda/envs/scvi-env/bin/python, /opt/conda/envs/spatial_represent/bin/python:spatial_represent:Conda:/opt/conda/envs/spatial_represent/bin/python, /opt/conda/envs/spatialccc/bin/python:spatialccc:Conda:/opt/conda/envs/spatialccc/bin/python, /opt/conda/envs/squidpy/bin/python:squidpy:Conda:/opt/conda/envs/squidpy/bin/python, /opt/conda/envs/symphonypy/bin/python:symphonypy:Conda:/opt/conda/envs/symphonypy/bin/python, /opt/conda/envs/tangram/bin/python:tangram:Conda:/opt/conda/envs/tangram/bin/python, /opt/conda/envs/vision/bin/python:vision:Conda:/opt/conda/envs/vision/bin/python, /bin/python2::Unknown:/bin/python2, /bin/python3::Unknown:/bin/python3, /usr/bin/python2::Unknown:/usr/bin/python2, /usr/bin/python3::Unknown:/usr/bin/python3
19:41:02.246 [debug] Refreshed Environments
19:41:02.261 [debug] Kernels for interpreter /usr/bin/python3 are .jvsc74a57bd031f2aee4e71d21fbe5cf8b01ff0e069b9275f58929596ceb00d14d90e3e16cd6./usr/bin/python3./usr/bin/python3.-m#ipykernel_launcher
19:41:02.725 [debug] KernelProvider switched kernel to id = .jvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd./opt/conda/envs/scvi-env/python./opt/conda/envs/scvi-env/python.-m#ipykernel_launcher
19:41:02.726 [debug] start the kernel, options.disableUI=true for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:02.727 [debug] Initialize notebook communications for editor /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:02.727 [debug] Resolving notebook UI Comms (resolve) for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:02.728 [debug] initialize CommonMessageCoordinator
19:41:02.729 [debug] Registering commtarget jupyter.widget
19:41:02.729 [debug] IPyWidgetMessageDispatcher.initialize
19:41:02.729 [debug] Attempting to determine version of IPyWidgets
19:41:02.730 [debug] Controller selection change completed
19:41:02.730 [debug] Waiting for IPyWidgets version
19:41:02.730 [debug] Waiting for IPyWidgets version promise
19:41:02.733 [debug] Getting activated env variables, Class name = za (started execution), Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "/opt/conda/envs/scvi-env/bin/python", Arg 3: undefined
19:41:02.733 [debug] Get Custom Env Variables, Class name = Kl (started execution), Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "RunPythonCode"
19:41:02.733 [debug] Get Custom Env Variables, Class name = Kl, completed in 0ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "RunPythonCode"
19:41:02.782 [info] Starting Kernel startUsingPythonInterpreter, .jvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd./opt/conda/envs/scvi-env/python./opt/conda/envs/scvi-env/python.-m#ipykernel_launcher  (Python Path: /opt/conda/envs/scvi-env/bin/python, Conda, scvi-env, 3.9.15) for '/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb' (disableUI=true)
19:41:02.784 [debug] Creating raw notebook for resource '/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb'
19:41:02.791 [debug] Kernel Launcher. launch, Class name = ty (started execution), Arg 1: ".jvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd./opt/conda/envs/scvi-env/python./opt/conda/envs/scvi-env/python.-m#ipykernel_launcher", Arg 2: 60000, Arg 3: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 4: "/data/projects/dschaub/anca-project/notebooks/figures", Arg 5: ""
19:41:02.799 [debug] Getting activated env variables, Class name = za (started execution), Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 2: "/opt/conda/envs/scvi-env/bin/python", Arg 3: undefined
19:41:02.799 [debug] Get Custom Env Variables, Class name = Kl (started execution), Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 2: "RunPythonCode"
19:41:02.800 [debug] Get Custom Env Variables, Class name = Kl, completed in 1ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 2: "RunPythonCode"
19:41:03.033 [debug] Launching kernel in kernelProcess.ts, Class name = Zv (started execution), Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures", Arg 2: ""
19:41:05.861 [debug] Got env vars with python /opt/conda/envs/scvi-env/bin/python, with env var count 125 in 3128ms. 
    PATH value is /opt/conda/envs/scvi-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:05.861 [debug] Prepend PATH with python bin for /opt/conda/envs/scvi-env/bin/python, 
    PATH value is /opt/conda/envs/scvi-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:05.861 [debug] Activated Env Variables for /opt/conda/envs/scvi-env/bin/python, 
    PATH value is /opt/conda/envs/scvi-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:05.861 [debug] Getting activated env variables, Class name = za, completed in 3128ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project", Arg 2: "/opt/conda/envs/scvi-env/bin/python", Arg 3: undefined
19:41:05.912 [info] Process Execution: /opt/conda/envs/scvi-env/bin/python -m pip list
19:41:05.931 [debug] Got env vars with python /opt/conda/envs/scvi-env/bin/python, with env var count 125 in 3132ms. 
    PATH value is /opt/conda/envs/scvi-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:05.931 [debug] Prepend PATH with python bin for /opt/conda/envs/scvi-env/bin/python, 
    PATH value is /opt/conda/envs/scvi-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:05.931 [debug] Activated Env Variables for /opt/conda/envs/scvi-env/bin/python, 
    PATH value is /opt/conda/envs/scvi-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux and 
    Path value is undefined
19:41:05.932 [debug] Getting activated env variables, Class name = za, completed in 3133ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 2: "/opt/conda/envs/scvi-env/bin/python", Arg 3: undefined
19:41:05.981 [info] Process Execution: /opt/conda/envs/scvi-env/bin/python -c "import ipykernel; print(ipykernel.__version__); print("5dc3a68c-e34e-4080-9c3e-2a532b2ccb4d"); print(ipykernel.__file__)"
19:41:05.982 [debug] Kernel Env Variables for ~/.vscode-server/extensions/ms-toolsai.jupyter-2023.9.1102792234-linux-x64/temp/jupyter/kernels/pythonjvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd/kernel.json, PATH value is /opt/conda/envs/scvi-env/bin:/opt/conda/condabin:~/.vscode-server/bin/f1b07bd25dfad64b0167beb15359ae573aecd2cc/bin/remote-cli:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/TinyTeX/bin/x86_64-linux
19:41:06.030 [info] Process Execution: /opt/conda/envs/scvi-env/bin/python -m ipykernel_launcher --ip=127.0.0.1 --stdin=9003 --control=9001 --hb=9000 --Session.signature_scheme="hmac-sha256" --Session.key=b"30d1daaa-8c06-4d4b-8b4d-d2e69c7c5e6c" --shell=9002 --transport="tcp" --iopub=9004 --f=~/.local/share/jupyter/runtime/kernel-v2-283078L0hhn72wW0YZ.json
    > cwd: /data/projects/dschaub/anca-project/notebooks/figures
19:41:06.031 [debug] Launching kernel in kernelProcess.ts, Class name = Zv, completed in 2998ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures", Arg 2: ""
19:41:06.123 [info] ipykernel version & path 6.21.0, /opt/conda/envs/scvi-env/lib/python3.9/site-packages/ipykernel/__init__.py for /opt/conda/envs/scvi-env/bin/python
19:41:06.514 [debug] KernelProcess output: NOTE: When using the `ipython kernel` entry point, Ctrl-C will not work.

To exit, you will have to explicitly quit this process, by either sending
"quit" from a client, or using Ctrl-\ in UNIX-like environments.

To read more about this, see https://github.com/ipython/ipython/issues/2049


To connect another client to this kernel, use:
    --existing kernel-v2-283078L0hhn72wW0YZ.json

19:41:06.514 [debug] Kernel Output: To connect another client to this kernel, use: --existing kernel-v2-283078L0hhn72wW0YZ.json

19:41:06.690 [debug] Kernel Launcher. launch, Class name = ty, completed in 3899ms, has a truthy return value, Arg 1: ".jvsc74a57bd0ed50826cc9176c364e75b70f9b6893eb64063b9327fd23c94128102511a2a1fd./opt/conda/envs/scvi-env/python./opt/conda/envs/scvi-env/python.-m#ipykernel_launcher", Arg 2: 60000, Arg 3: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 4: "/data/projects/dschaub/anca-project/notebooks/figures", Arg 5: ""
19:41:06.700 [debug] Waiting for Raw Session to be ready in postStartRawSession
19:41:06.700 [debug] Waiting for Raw session to be ready, currently connected
19:41:06.700 [debug] Raw session connected
19:41:06.700 [debug] Waiting for Raw session to be ready for 30s
19:41:06.701 [debug] Waited for Raw session to be ready & got connected
19:41:06.701 [debug] Successfully waited for Raw Session to be ready in postStartRawSession
19:41:06.701 [debug] Kernel status before requesting kernel info and after ready is unknown
19:41:06.701 [debug] Sending request for kernelInfo
19:41:06.706 [debug] Got response for requestKernelInfo
19:41:06.706 [debug] Successfully completed postStartRawSession
19:41:06.708 [debug] Begin sendTelemetryForPythonKernelExecutable
19:41:06.709 [debug] Executing silently Code (idle) = import sys as _VSCODE_sys\nprint(_VSCODE_sys.executable); del _VSCODE_sys
19:41:06.719 [debug] Executing silently Code (completed) = import sys as _VSCODE_sys\nprint(_VSCODE_sys.executable); del _VSCODE_sys with 1 output(s)
19:41:06.719 [debug] End sendTelemetryForPythonKernelExecutable
19:41:06.719 [debug] Started running kernel initialization for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:06.721 [debug] Executing silently Code (idle) = try:\nimport ipywidgets as _VSCODE_ipywidgets\nprint("e976ee50-99ed-4aba-9b6b-9dcd5634d07d:IPy
19:41:06.771 [debug] Executing silently Code (completed) = try:\nimport ipywidgets as _VSCODE_ipywidgets\nprint("e976ee50-99ed-4aba-9b6b-9dcd5634d07d:IPy with 1 output(s)
19:41:06.771 [debug] Determined IPyWidgets Version as 8 and event fired
19:41:06.771 [debug] Version of IPyWidgets 8 determined after 4.042s
19:41:06.774 [debug] Executing silently Code (idle) = import os as _VSCODE_os\nimport sys as _VSCODE_sys\n%cd "//data/projects/dschaub/anca-project/notebook
19:41:06.806 [debug] Executing silently Code (completed) = import os as _VSCODE_os\nimport sys as _VSCODE_sys\n%cd "//data/projects/dschaub/anca-project/notebook with 1 output(s)
19:41:06.806 [debug] Requesting Kernel info
19:41:06.807 [debug] Got Kernel info
19:41:06.807 [debug] End running kernel initialization, now waiting for idle
19:41:06.807 [debug] Waiting for 60000ms idle on (kernel): f83ee6a4-b715-44a6-a1cb-293a843c44b8 -> idle
19:41:06.807 [debug] Finished waiting for idle on (kernel): f83ee6a4-b715-44a6-a1cb-293a843c44b8 -> idle
19:41:06.807 [debug] End running kernel initialization, session is idle
19:41:06.809 [debug] IPyWidgetScriptSource.initialize
19:41:06.809 [debug] IPyWidgetMessageDispatcher.initialize
19:41:06.810 [debug] getDataDirsImpl, Class name = vf (started execution), Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 2: "/opt/conda/envs/scvi-env/bin/python"
19:41:06.810 [debug] Get Custom Env Variables, Class name = Kl (started execution), Arg 1: undefined, Arg 2: "RunPythonCode"
19:41:06.811 [debug] Get Custom Env Variables, Class name = Kl, completed in 1ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode"
19:41:06.811 [debug] Jupyter Paths : 
19:41:06.858 [info] Process Execution: /opt/conda/envs/scvi-env/bin/python ~/.vscode-server/extensions/ms-toolsai.jupyter-2023.9.1102792234-linux-x64/pythonFiles/printJupyterDataDir.py
19:41:06.883 [debug] getDataDirsImpl, Class name = vf, completed in 72ms, has a truthy return value, Arg 1: "/data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb", Arg 2: "/opt/conda/envs/scvi-env/bin/python"
19:41:07.443 [debug] IPyWidgetMessageDispatcher.initialize
19:41:07.444 [debug] Web view is ready to receive widget messages
19:41:07.481 [debug] Widget Message: Received IPyWidgets_kernelOptions in ScriptManager
19:41:07.484 [debug] Widget Message: Received IPyWidgetMessages.IPyWidgets_kernelOptions
19:41:07.485 [debug] IPyWidgetMessageDispatcher.initialize
19:41:07.486 [debug] IPyWidgetMessageDispatcher.initialize
19:41:07.490 [debug] Widget Message: data-base-url set to https://vscode-remote%2Battached-002dcontainer-002b7b22636f6e7461696e65724e616d65223a222f6a7570797465722d64736368617562222c2273657474696e6773223a7b22686f7374223a227373683a2f2f626f6e6e2d65707963227d7d.vscode-resource.vscode-cdn.net~/.vscode-server/extensions/ms-toolsai.jupyter-2023.9.1102792234-linux-x64/temp/scripts/3884e9efaa0d72d4ae013274017b58bc3bde22346f8f29a29514ac205f302cf4/jupyter
19:41:07.490 [debug] Widget Message: Received IPyWidgets_kernelOptions in ScriptManager
19:41:07.490 [debug] Widget Message: Received IPyWidgetMessages.IPyWidgets_kernelOptions
19:41:07.490 [debug] Widget Message: data-base-url set to https://vscode-remote%2Battached-002dcontainer-002b7b22636f6e7461696e65724e616d65223a222f6a7570797465722d64736368617562222c2273657474696e6773223a7b22686f7374223a227373683a2f2f626f6e6e2d65707963227d7d.vscode-resource.vscode-cdn.net~/.vscode-server/extensions/ms-toolsai.jupyter-2023.9.1102792234-linux-x64/temp/scripts/3884e9efaa0d72d4ae013274017b58bc3bde22346f8f29a29514ac205f302cf4/jupyter
19:41:17.291 [debug] Updating cache with Local kernels startUsingLocalKernelSpec:'.ir./usr/local/lib/R/bin/R././usr/local/lib/r/bin/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = )', startUsingLocalKernelSpec:'.sc-kernel./opt/conda/envs/scrna-env/bin/python3.8./opt/conda/envs/scrna-env/bin/python3.8.-m#ipykernel_launcher (interpreter id = /opt/conda/envs/scrna-env/bin/python3.8)', startUsingLocalKernelSpec:'.jvsc74a57bd0d4d1e4263499bec80672ea0156c357c1ee493ec2b1c70f0acce89fc37c4a6abe#bash./opt/conda/python././opt/conda/bin/python#-m#bash_kernel#-f#{connection_file} (interpreter id = /opt/conda/bin/python)', Added = , Updated = , Removed = 
19:41:40.031 [info] End refreshing Kernel Picker (1697917248861)
19:41:44.354 [info] Handle Execution of Cells 0 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:44.357 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:44.362 [debug] Execution Request Sent to Kernel for cell 0
19:41:44.373 [debug] Start cell 0 execution @ 1697917304373 (clear output)
19:41:44.374 [info] Kernel acknowledged execution of cell 0 @ 1697917304373
19:41:51.590 [info] End cell 0 execution @ 1697917311590, started @ 1697917304373, elapsed time = 7.217s
19:41:51.591 [debug] Cell 0 executed with state Success
19:41:52.392 [info] Handle Execution of Cells 2 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:52.393 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:41:52.395 [debug] Execution Request Sent to Kernel for cell 2
19:41:52.401 [debug] Start cell 2 execution @ 1697917312400 (clear output)
19:41:52.401 [info] Kernel acknowledged execution of cell 2 @ 1697917312400
19:41:54.541 [info] End cell 2 execution @ 1697917314541, started @ 1697917312400, elapsed time = 2.141s
19:41:54.541 [debug] Cell 2 executed with state Success
19:42:02.531 [info] Handle Execution of Cells 5 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:02.538 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:02.539 [debug] Execution Request Sent to Kernel for cell 5
19:42:02.545 [debug] Start cell 5 execution @ 1697917322545 (clear output)
19:42:02.545 [info] Kernel acknowledged execution of cell 5 @ 1697917322545
19:42:02.847 [info] End cell 5 execution @ 1697917322846, started @ 1697917322545, elapsed time = 0.301s
19:42:02.847 [debug] Cell 5 executed with state Success
19:42:02.952 [info] Handle Execution of Cells 3 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:02.953 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:02.954 [debug] Execution Request Sent to Kernel for cell 3
19:42:02.959 [debug] Start cell 3 execution @ 1697917322959 (clear output)
19:42:02.959 [info] Kernel acknowledged execution of cell 3 @ 1697917322959
19:42:03.017 [info] End cell 3 execution @ 1697917323016, started @ 1697917322959, elapsed time = 0.057s
19:42:03.017 [debug] Cell 3 executed with state Success
19:42:03.077 [info] Handle Execution of Cells 4 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:03.077 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:03.078 [debug] Execution Request Sent to Kernel for cell 4
19:42:03.085 [debug] Start cell 4 execution @ 1697917323085 (clear output)
19:42:03.085 [info] Kernel acknowledged execution of cell 4 @ 1697917323085
19:42:03.139 [info] End cell 4 execution @ 1697917323139, started @ 1697917323085, elapsed time = 0.054s
19:42:03.139 [debug] Cell 4 executed with state Success
19:42:14.717 [info] Handle Execution of Cells 6 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:14.719 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:14.721 [debug] Execution Request Sent to Kernel for cell 6
19:42:14.727 [debug] Start cell 6 execution @ 1697917334727 (clear output)
19:42:14.728 [info] Kernel acknowledged execution of cell 6 @ 1697917334727
19:42:14.847 [info] Handle Execution of Cells 8 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:14.848 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:16.311 [info] End cell 6 execution @ 1697917336310, started @ 1697917334727, elapsed time = 1.583s
19:42:16.311 [debug] Execution Request Sent to Kernel for cell 8
19:42:16.312 [debug] Cell 6 executed with state Success
19:42:16.316 [debug] Start cell 8 execution @ 1697917336316 (clear output)
19:42:16.316 [info] Kernel acknowledged execution of cell 8 @ 1697917336316
19:42:19.219 [info] End cell 8 execution @ 1697917339218, started @ 1697917336316, elapsed time = 2.902s
19:42:19.219 [debug] Cell 8 executed with state Success
19:42:40.034 [info] Handle Execution of Cells 9 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:40.035 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:40.038 [debug] Execution Request Sent to Kernel for cell 9
19:42:40.048 [debug] Start cell 9 execution @ 1697917360047 (clear output)
19:42:40.048 [info] Kernel acknowledged execution of cell 9 @ 1697917360047
19:42:41.631 [info] End cell 9 execution @ 1697917361631, started @ 1697917360047, elapsed time = 1.584s
19:42:41.632 [debug] Cell 9 executed with state Success
19:42:51.491 [info] Handle Execution of Cells 10 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:51.492 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:42:51.494 [debug] Execution Request Sent to Kernel for cell 10
19:42:51.500 [debug] Start cell 10 execution @ 1697917371500 (clear output)
19:42:51.500 [info] Kernel acknowledged execution of cell 10 @ 1697917371500
19:42:51.791 [info] End cell 10 execution @ 1697917371791, started @ 1697917371500, elapsed time = 0.291s
19:42:51.792 [debug] Cell 10 executed with state Success
19:43:04.830 [info] Handle Execution of Cells 11 for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:43:04.832 [debug] start the kernel, options.disableUI=false for /data/projects/dschaub/anca-project/notebooks/figures/figures_main.ipynb
19:43:04.835 [debug] Execution Request Sent to Kernel for cell 11
19:43:04.842 [debug] Start cell 11 execution @ 1697917384842 (clear output)
19:43:04.842 [info] Kernel acknowledged execution of cell 11 @ 1697917384842
19:43:04.890 [info] End cell 11 execution @ 1697917384889, started @ 1697917384842, elapsed time = 0.047s
19:43:04.890 [debug] Cell 11 executed with state Success