diff --git a/change/@fluentui-react-theme-73e5224a-d14f-44b4-9654-50ffacea3a08.json b/change/@fluentui-react-theme-73e5224a-d14f-44b4-9654-50ffacea3a08.json
new file mode 100644
index 00000000000000..4c1d9ea2c3ea4d
--- /dev/null
+++ b/change/@fluentui-react-theme-73e5224a-d14f-44b4-9654-50ffacea3a08.json
@@ -0,0 +1,7 @@
+{
+  "type": "patch",
+  "comment": "chore: Migrate to new package structure.",
+  "packageName": "@fluentui/react-theme",
+  "email": "tristan.watanabe@gmail.com",
+  "dependentChangeType": "patch"
+}
diff --git a/packages/react-components/react-theme/.npmignore b/packages/react-components/react-theme/.npmignore
index 52d2a7273a151d..f7ce568a6dbf7c 100644
--- a/packages/react-components/react-theme/.npmignore
+++ b/packages/react-components/react-theme/.npmignore
@@ -3,10 +3,11 @@
 bundle-size/
 config/
 coverage/
-e2e/
+docs/
 etc/
 node_modules/
 src/
+stories/
 dist/types/
 temp/
 __fixtures__
@@ -16,7 +17,7 @@ __tests__
 *.api.json
 *.log
 *.spec.*
-*.stories.*
+*.cy.*
 *.test.*
 *.yml
 
diff --git a/packages/react-components/react-theme/.storybook/main.js b/packages/react-components/react-theme/.storybook/main.js
index f57cfd09509e78..26536b61b387f6 100644
--- a/packages/react-components/react-theme/.storybook/main.js
+++ b/packages/react-components/react-theme/.storybook/main.js
@@ -2,7 +2,7 @@ const rootMain = require('../../../../.storybook/main');
 
 module.exports = /** @type {Omit<import('../../../../.storybook/main'), 'typescript'|'babel'>} */ ({
   ...rootMain,
-  stories: [...rootMain.stories, '../src/**/*.stories.mdx', '../src/**/index.stories.@(ts|tsx)'],
+  stories: [...rootMain.stories, '../stories/**/*.stories.mdx', '../stories/**/index.stories.@(ts|tsx)'],
   addons: [...rootMain.addons],
   webpackFinal: (config, options) => {
     const localConfig = { ...rootMain.webpackFinal(config, options) };
diff --git a/packages/react-components/react-theme/.storybook/tsconfig.json b/packages/react-components/react-theme/.storybook/tsconfig.json
index f9f60e1234ed49..ea89218a3d916f 100644
--- a/packages/react-components/react-theme/.storybook/tsconfig.json
+++ b/packages/react-components/react-theme/.storybook/tsconfig.json
@@ -6,5 +6,5 @@
     "checkJs": true,
     "types": ["static-assets", "environment", "storybook__addons"]
   },
-  "include": ["../src/**/*.stories.ts", "../src/**/*.stories.tsx", "*.js"]
+  "include": ["../stories/**/*.stories.ts", "../stories/**/*.stories.tsx", "*.js"]
 }
diff --git a/packages/react-components/react-theme/src/stories/Theme/colors/ColorRamp.stories.tsx b/packages/react-components/react-theme/stories/Theme/colors/ColorRamp.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/colors/ColorRamp.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/colors/ColorRamp.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/colors/ThemeColors.stories.tsx b/packages/react-components/react-theme/stories/Theme/colors/ThemeColors.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/colors/ThemeColors.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/colors/ThemeColors.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/colors/ThemeShadows.stories.tsx b/packages/react-components/react-theme/stories/Theme/colors/ThemeShadows.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/colors/ThemeShadows.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/colors/ThemeShadows.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/colors/index.stories.mdx b/packages/react-components/react-theme/stories/Theme/colors/index.stories.mdx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/colors/index.stories.mdx
rename to packages/react-components/react-theme/stories/Theme/colors/index.stories.mdx
diff --git a/packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeBorderRadii.stories.tsx b/packages/react-components/react-theme/stories/Theme/motion-size/ThemeBorderRadii.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeBorderRadii.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/motion-size/ThemeBorderRadii.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeMotion.stories.tsx b/packages/react-components/react-theme/stories/Theme/motion-size/ThemeMotion.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeMotion.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/motion-size/ThemeMotion.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeSpacing.stories.tsx b/packages/react-components/react-theme/stories/Theme/motion-size/ThemeSpacing.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeSpacing.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/motion-size/ThemeSpacing.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeStrokeWidths.stories.tsx b/packages/react-components/react-theme/stories/Theme/motion-size/ThemeStrokeWidths.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/motion-size/ThemeStrokeWidths.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/motion-size/ThemeStrokeWidths.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/motion-size/index.stories.mdx b/packages/react-components/react-theme/stories/Theme/motion-size/index.stories.mdx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/motion-size/index.stories.mdx
rename to packages/react-components/react-theme/stories/Theme/motion-size/index.stories.mdx
diff --git a/packages/react-components/react-theme/src/stories/Theme/typography/ThemeTypography.stories.tsx b/packages/react-components/react-theme/stories/Theme/typography/ThemeTypography.stories.tsx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/typography/ThemeTypography.stories.tsx
rename to packages/react-components/react-theme/stories/Theme/typography/ThemeTypography.stories.tsx
diff --git a/packages/react-components/react-theme/src/stories/Theme/typography/index.stories.mdx b/packages/react-components/react-theme/stories/Theme/typography/index.stories.mdx
similarity index 100%
rename from packages/react-components/react-theme/src/stories/Theme/typography/index.stories.mdx
rename to packages/react-components/react-theme/stories/Theme/typography/index.stories.mdx