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DESCRIPTION
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Package: plantecowrap
Type: Package
Title: Enhancing Capabilities of 'plantecophys'
Date: 2020-04-02
Version: 1.0.5
Authors@R: c(person("Joseph", "Stinziano", email = "[email protected]",
role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7628-4201")),
person("Demi", "Gamble", email = "[email protected]", role = "aut"),
person("Robert", "Sharwood", email = "[email protected]",
role = "aut"), person("Warren", "Conaty", email = "Warren.Conaty.csiro.au",
role = "aut"))
Maintainer: Joseph Stinziano <[email protected]>
Description: Provides wrapping functions to add to capabilities to 'plantecophys'
(Duursma, 2015, <doi:10.1371/journal.pone.0143346>). Key added capabilities
include temperature responses of mesophyll conductance (gm, gmeso), apparent
Michaelis-Menten constant for rubisco carboxylation in air (Km, Kcair),and
photorespiratory CO2 compensation point (GammaStar) for fitting A-Ci or A-Cc
curves for C3 plants (for temperature responses of gm, Km, & GammaStar, see
Bernacchi et al., 2002, <doi:10.1104/pp.008250>; for theory on fitting A-Ci
or A-Cc curves, see Farquhar et al., 1980; <doi:10.1007/BF00386231>, von
Caemmerer, 2000, ISBN:064306379X; Ethier & Livingston, 2004
<doi:10.1111/j.1365-3040.2004.01140.x>; and Gu et al., 2010,
<doi:10.1111/j.1365-3040.2010.02192.x>). Includes the ability to fit the
Arrhenius and modified Arrhenius temperature response functions (see Medlyn
et al., 2002, <doi:10.1046/j.1365-3040.2002.00891.x>) for maximum rubisco
carboxylation rates (Vcmax) and maximum electron transport rates (Jmax) (see
Farquhar et al., 1980; <doi:10.1007/BF00386231>).
URL: https://github.com/jstinzi/plantecowrap
BugReports: https://github.com/jstinzi/plantecowrap/issues
License: MIT + file LICENSE
Depends: R (>= 3.5.0),
ggplot2 (>= 3.2.1),
minpack.lm (>= 1.2-1),
plantecophys (>= 1.4-4),
tidyr (>= 1.0.0)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
Suggests: knitr,
rmarkdown,
testthat
VignetteBuilder: knitr