Rigatoni

Rigatoni is an experimental port, based on the EBImage package, of the grainito (https://github.com/jframi/grainito) ImageJ macro.

Installation

Install dependencies from CRAN

install.packages("data.table")
install.packages("polylabelr")
install.packages("polyclip")
install.packages("devtools")

Install dependencies from github

devtools::install_github("MomX/Momocs2")

Install dependencies from Bioconductor

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("EBImage")

Then install Rigatoni from github

devtools::install_github("jframi/rigatoni")

Getting started

Read the Vignette to get started