diff --git a/scripts/deploy.sh b/scripts/deploy.sh
deleted file mode 100755
index fae554c8f..000000000
--- a/scripts/deploy.sh
+++ /dev/null
@@ -1,95 +0,0 @@
-#!/bin/bash
-
-# GitHub Token Manager Deployment Script
-# This script helps you deploy the GitHub Token Manager to Cloudflare Workers
-
-set -e
-
-echo "🚀 GitHub Token Manager Deployment Script"
-echo "=========================================="
-
-# Check if wrangler is installed
-if ! command -v wrangler &>/dev/null; then
-	echo "❌ Wrangler CLI is not installed. Please install it first:"
-	echo "   npm install -g wrangler"
-	exit 1
-fi
-
-# Check if user is logged in to Wrangler
-if ! wrangler whoami &>/dev/null; then
-	echo "🔐 Please log in to Wrangler first:"
-	echo "   wrangler login"
-	exit 1
-fi
-
-echo "✅ Wrangler is installed and you're logged in"
-
-# Install dependencies
-echo "📦 Installing dependencies..."
-npm install
-
-# Function to prompt for secret
-prompt_for_secret() {
-	local secret_name=$1
-	local description=$2
-
-	echo ""
-	echo "🔑 Setting up $secret_name"
-	echo "   Description: $description"
-
-	if wrangler secret list | grep -q "$secret_name"; then
-		echo "   ✅ $secret_name already exists"
-	else
-		echo "   Please enter the value:"
-		wrangler secret put "$secret_name"
-	fi
-}
-
-echo ""
-echo "🔐 Setting up secrets..."
-echo "You'll need the following information from your GitHub App:"
-
-prompt_for_secret "GITHUB_APP_ID" "Your GitHub App ID (numeric)"
-prompt_for_secret "GITHUB_PRIVATE_KEY" "Your GitHub App private key (PEM format, including -----BEGIN/END----- lines)"
-prompt_for_secret "GITHUB_CLIENT_ID" "Your GitHub App client ID"
-prompt_for_secret "GITHUB_CLIENT_SECRET" "Your GitHub App client secret"
-prompt_for_secret "GITHUB_WEBHOOK_SECRET" "Your GitHub App webhook secret"
-prompt_for_secret "API_SECRET" "A secure random string for API authentication (generate one with: openssl rand -hex 32)"
-
-echo ""
-echo "🏗️  Deploying to Cloudflare Workers..."
-wrangler deploy
-
-# Get the deployment URL
-WORKER_URL=$(wrangler deployments list --name mise-versions --json | jq -r '.[0].url' 2>/dev/null || echo "")
-
-if [ -z "$WORKER_URL" ]; then
-	echo "⚠️  Could not automatically detect worker URL. Please check your deployment manually."
-	echo "   Run: wrangler deployments list"
-else
-	echo ""
-	echo "🎉 Deployment successful!"
-	echo "📍 Worker URL: $WORKER_URL"
-	echo ""
-	echo "✅ Database will auto-initialize on first request"
-
-	echo ""
-	echo "📝 Next steps:"
-	echo "1. Update your GitHub App settings:"
-	echo "   - Webhook URL: $WORKER_URL/webhooks/github"
-	echo "   - Homepage URL: $WORKER_URL"
-	echo ""
-	echo "2. Install your GitHub App on the repositories you want to manage"
-	echo ""
-	echo "3. Add these secrets to your GitHub repository for Actions:"
-	echo "   - TOKEN_MANAGER_URL: $WORKER_URL"
-	echo "   - TOKEN_MANAGER_SECRET: (the API_SECRET you set above)"
-	echo ""
-	echo "4. Test the deployment:"
-	echo "   curl $WORKER_URL/health"
-	echo ""
-	echo "📖 See README.md for usage instructions and examples."
-fi
-
-echo ""
-echo "🎯 Deployment complete! Happy coding!"
diff --git a/web/env.d.ts b/web/env.d.ts
index 17083ff7a..716248ecf 100644
--- a/web/env.d.ts
+++ b/web/env.d.ts
@@ -19,11 +19,8 @@ interface Env {
   DATA_BUCKET: R2Bucket;
   GITHUB_CACHE: KVNamespace;
   DOWNLOAD_DEDUPE: KVNamespace;
-  GITHUB_APP_ID: string;
-  GITHUB_PRIVATE_KEY: string;
   GITHUB_CLIENT_ID: string;
   GITHUB_CLIENT_SECRET: string;
-  GITHUB_WEBHOOK_SECRET: string;
   API_SECRET: string;
 }
 
diff --git a/web/src/pages/webhooks/github.ts b/web/src/pages/webhooks/github.ts
deleted file mode 100644
index a28380b93..000000000
--- a/web/src/pages/webhooks/github.ts
+++ /dev/null
@@ -1,14 +0,0 @@
-import type { APIRoute } from "astro";
-import { CORS_HEADERS } from "../../lib/api";
-
-// POST /webhooks/github - GitHub webhooks handler
-export const POST: APIRoute = async ({ request }) => {
-  const eventType = request.headers.get("x-github-event");
-
-  console.log(`Webhook received: ${eventType} event`);
-
-  return new Response("Webhook processed", {
-    status: 200,
-    headers: CORS_HEADERS,
-  });
-};
diff --git a/wrangler.jsonc b/wrangler.jsonc
index 8416d566d..d758acc74 100644
--- a/wrangler.jsonc
+++ b/wrangler.jsonc
@@ -58,10 +58,7 @@
     "ENVIRONMENT": "production",
   },
   // Environment variables that need to be set via wrangler secret:
-  // GITHUB_APP_ID - Your GitHub App ID
-  // GITHUB_PRIVATE_KEY - Your GitHub App private key (PEM format)
   // GITHUB_CLIENT_ID - Your GitHub App client ID
   // GITHUB_CLIENT_SECRET - Your GitHub App client secret
-  // GITHUB_WEBHOOK_SECRET - Your GitHub App webhook secret
   // API_SECRET - Secret for GitHub Actions authentication
 }