diff --git a/hack/api_transformer/transform.yaml b/hack/api_transformer/transform.yaml
index c546c791de..2ce3aa742b 100644
--- a/hack/api_transformer/transform.yaml
+++ b/hack/api_transformer/transform.yaml
@@ -118,6 +118,11 @@ inputFiles:
       PilotConfig.Volumes: "[]k8sv1.Volume"
       ProxyConfig.Resources: "*k8sv1.ResourceRequirements"
       ProxyConfig.Lifecycle: "*k8sv1.Lifecycle"
+      ProxyConfig.SeccompProfile: "*k8sv1.SeccompProfile"
+      WaypointConfig.Affinity: "*k8sv1.Affinity"
+      WaypointConfig.TopologySpreadConstraints: "[]*k8sv1.TopologySpreadConstraint"
+      WaypointConfig.NodeSelector: "*k8sv1.NodeSelector"
+      WaypointConfig.Toleration: "[]*k8sv1.Toleration"
       SDSConfig.Token: "*SDSConfigToken"
       SidecarInjectorConfig.NeverInjectSelector: "[]metav1.LabelSelector"
       SidecarInjectorConfig.AlwaysInjectSelector: "[]metav1.LabelSelector"