New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

hg38 Import custom reference upload error #72

Open

potulabe opened this issue Jul 12, 2021 · 0 comments

potulabe commented Jul 12, 2021

Our version of TS is 5.12.2

When trying to upload new custom reference fasta (downloaded from ncbi https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/405/GCA_000001405.15_GRCh38/seqs_for_alignment_pipelines.ucsc_ids/GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz, gunzipped and renamed to hg38.fasta) through "Import custom reference" in interface an error occures: "uploaded file size is incorrect" (to be honest the error was not shown in logs, because of TypeError in this line of iondb code "cannot concatenate 'str' and 'proxy' objects")

This initial error maybe because of large file size, how can we upload a genome fasta in this case?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment