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Update dependent projects. #38

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tpietzsch opened this issue Jan 5, 2024 · 1 comment
Open
6 tasks
Tracked by #37

Update dependent projects. #38

tpietzsch opened this issue Jan 5, 2024 · 1 comment
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@tpietzsch
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tpietzsch commented Jan 5, 2024

  • Release a version of imglib2-ij with everything under package net.imglib2.ij.
  • Identify dependent projects.
  • For each dependent project: Use new imglib2-ij version in POM
  • For each dependent project: Update package for all occurrences of imglib2-ij classes.
  • For each dependent project: Create PR
  • Track PR progress until new imglib2-ij version can be propagated to pom-scijava
@tpietzsch tpietzsch added the JPMS label Jan 5, 2024
@tpietzsch tpietzsch changed the title Update dependant projects. Update dependent projects. Jan 5, 2024
@tpietzsch tpietzsch moved this to In Progress in Modularization Jan 5, 2024
@tpietzsch tpietzsch self-assigned this Jan 5, 2024
@tpietzsch tpietzsch moved this from In Progress to To Do in Modularization Jan 5, 2024
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Using the utilities from https://github.com/imglib/modularization, the following repositories were found to use classes from imglib2-ij:

https://github.com/imagej/imagej-legacy
https://github.com/imglib/imglib2-algorithm
https://github.com/imglib/imglib2-ij
https://github.com/fiji/Colocalisation_Analysis
https://github.com/fiji/FilamentDetector
https://github.com/fiji/Graph_Cut
https://github.com/fiji/Image_Expression_Parser
https://github.com/fiji/Kappa
https://github.com/fiji/SPIM_Registration
https://github.com/fiji/Stitching
https://github.com/fiji/Trainable_Segmentation
https://github.com/fiji/blockmatching
https://github.com/fiji/legacy-imglib1
https://github.com/saalfeldlab/bigwarp
https://github.com/saalfeldlab/z-spacing
https://github.com/bigdataviewer/bigdataviewer_fiji
https://github.com/trackmate-sc/TrackMate
https://github.com/trackmate-sc/TrackMate-Cellpose
https://github.com/trackmate-sc/TrackMate-Ilastik
https://github.com/trackmate-sc/TrackMate-MorphoLibJ
https://github.com/trackmate-sc/TrackMate-Oneat
https://github.com/trackmate-sc/TrackMate-Skeleton
https://github.com/trackmate-sc/TrackMate-StarDist
https://github.com/trackmate-sc/TrackMate-Weka
https://github.com/trakem2/TrakEM2
https://github.com/saalfeldlab/n5
https://github.com/saalfeldlab/n5-ij
https://github.com/saalfeldlab/n5-viewer
https://github.com/PreibischLab/BigStitcher
https://github.com/PreibischLab/multiview-reconstruction
https://github.com/PreibischLab/multiview-simulation
https://github.com/morphonets/SNT
https://github.com/fiji/MaMuT
https://github.com/juglab/labkit-pixel-classification
https://github.com/juglab/labkit-ui

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