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Jan Hansen edited this page Mar 4, 2023 · 15 revisions

Welcome to the MotiQ wiki! In this Wiki, we provide additional guidelines to setup your optimal MotiQ analysis. Find below links to guides for individual topics.

Please note that the MotiQ wiki is a lively platform and more content and functions of the wiki will be realized in the future!

Getting started

Optimizing settings

Troubleshooting and problems

  • MotiQ 3D Analyzer reports No 3D visualization generated.... What to do now? Answers and explanations provided here.

Tips and tricks

  • Can I manually edit a segmented image output by MotiQ Thresholder? Yes! And, when working with cropped cells (using MotiQ Cropper), it can be more time efficient to edit a segmented image than to repeat cropping and segmentation. Explanations provided here.

Copyright (C) 2017-2024: Jan N. Hansen.

MotiQ is part of the following publication: Hansen et al., MotiQ: an open-source toolbox to quantify the cell motility and morphology of microglia, Molecular biology of the cell, 33:11 (2022). https://doi.org/10.1091/mbc.E21-11-0585

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