diff --git a/requirements/ubuntu-latest_py3.10.txt b/requirements/ubuntu-latest_py3.10.txt index 539ace113..c9ba4697e 100644 --- a/requirements/ubuntu-latest_py3.10.txt +++ b/requirements/ubuntu-latest_py3.10.txt @@ -5,110 +5,129 @@ # pip-compile --all-extras --output-file=requirements/ubuntu-latest_py3.10.txt # aflow==0.0.11 - # via matminer (setup.py) + # via + # matminer + # matminer (pyproject.toml) alabaster==1.0.0 # via sphinx -ase==3.23.0 +ase==3.26.0 # via # aflow # dscribe - # matminer (setup.py) -astroid==3.3.3 + # matminer + # matminer (pyproject.toml) +astroid==4.0.1 # via pylint -attrs==24.2.0 +attrs==25.4.0 # via # jsonschema # referencing -babel==2.16.0 +babel==2.17.0 # via sphinx -beautifulsoup4==4.12.3 +beautifulsoup4==4.14.2 # via aflow -black==24.8.0 - # via matminer (setup.py) -certifi==2024.8.30 +bibtexparser==1.4.3 + # via pymatgen +black==25.9.0 + # via + # matminer + # matminer (pyproject.toml) +certifi==2025.10.5 # via requests -cffi==1.17.1 +cffi==2.0.0 # via cryptography -charset-normalizer==3.3.2 +charset-normalizer==3.4.4 # via requests citrination-client==6.5.1 - # via matminer (setup.py) -click==8.1.7 + # via + # matminer + # matminer (pyproject.toml) +click==8.3.0 # via black -contourpy==1.3.0 +contourpy==1.3.2 # via matplotlib -coverage[toml]==7.6.1 +coverage[toml]==7.11.0 # via # coveralls - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pytest-cov coveralls==4.0.1 - # via matminer (setup.py) -cryptography==43.0.1 + # via + # matminer + # matminer (pyproject.toml) +cryptography==46.0.3 # via # globus-sdk # pyjwt cycler==0.12.1 # via matplotlib -dill==0.3.8 +dill==0.4.0 # via pylint -dnspython==2.6.1 +dnspython==2.8.0 # via pymongo docopt==0.6.2 # via coveralls docutils==0.21.2 # via sphinx -dscribe==2.1.1 - # via matminer (setup.py) -exceptiongroup==1.2.2 +dscribe==2.1.2 + # via matminer (pyproject.toml) +exceptiongroup==1.3.0 # via pytest fair-research-login==0.3.1 # via mdf-toolbox -flake8==7.1.1 - # via matminer (setup.py) -fonttools==4.53.1 +flake8==7.3.0 + # via + # matminer + # matminer (pyproject.toml) +fonttools==4.60.1 # via matplotlib -globus-sdk==3.45.0 +globus-sdk==3.65.0 # via # fair-research-login # mdf-forge # mdf-toolbox -httplib2==0.22.0 - # via matminer (setup.py) -idna==3.10 +httplib2==0.31.0 + # via + # matminer + # matminer (pyproject.toml) +idna==3.11 # via requests imagesize==1.4.1 # via sphinx -iniconfig==2.0.0 +iniconfig==2.3.0 # via pytest -isort==5.13.2 +isort==7.0.0 # via pylint -jinja2==3.1.4 +jinja2==3.1.6 # via # aflow # sphinx jmespath==1.0.1 - # via matminer (setup.py) -joblib==1.4.2 + # via + # matminer + # matminer (pyproject.toml) +joblib==1.5.2 # via # dscribe # pymatgen # scikit-learn -jsonschema==4.23.0 +jsonschema==4.25.1 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-toolbox -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2025.9.1 # via jsonschema -kiwisolver==1.4.7 +kiwisolver==1.4.9 # via matplotlib -latexcodec==3.0.0 - # via pybtex -llvmlite==0.43.0 +llvmlite==0.45.1 # via numba -markupsafe==2.1.5 +markupsafe==3.0.3 # via jinja2 -matplotlib==3.9.2 +matminer[aflow,citrine,describe,dev,mdfforge,mpds] @ file:///home/runner/work/matminer/matminer + # via matminer (pyproject.toml) +matplotlib==3.10.7 # via # ase # pymatgen @@ -117,29 +136,36 @@ mccabe==0.7.0 # flake8 # pylint mdf-forge==0.8.0 - # via matminer (setup.py) + # via + # matminer + # matminer (pyproject.toml) mdf-toolbox==0.7.1 # via mdf-forge -monty==2024.7.30 +monty==2025.3.3 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen mpmath==1.3.0 # via sympy -mypy-extensions==1.0.0 +mypy-extensions==1.1.0 # via black -networkx==3.3 +narwhals==2.8.0 + # via plotly +networkx==3.4.2 # via pymatgen -numba==0.60.0 +numba==0.62.1 # via sparse -numpy==1.26.4 +numpy==2.2.6 # via # aflow # ase # contourpy # dscribe - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # matplotlib + # monty # numba # pandas # pymatgen @@ -148,7 +174,9 @@ numpy==1.26.4 # scipy # sparse # spglib -packaging==24.1 +orjson==3.11.3 + # via pymatgen +packaging==25.0 # via # black # matplotlib @@ -157,115 +185,134 @@ packaging==24.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.2.3 +pandas==2.3.3 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen pathspec==0.12.1 # via black -pillow==10.4.0 +pillow==12.0.0 # via matplotlib -platformdirs==4.3.6 +platformdirs==4.5.0 # via # black # pylint -plotly==5.24.1 - # via pymatgen -pluggy==1.5.0 - # via pytest -pybtex==0.24.0 +plotly==6.3.1 # via pymatgen -pycodestyle==2.12.1 +pluggy==1.6.0 + # via + # pytest + # pytest-cov +pycodestyle==2.14.0 # via flake8 -pycparser==2.22 +pycparser==2.23 # via cffi -pyflakes==3.2.0 +pyflakes==3.4.0 # via flake8 -pygments==2.18.0 - # via sphinx -pyjwt[crypto]==2.9.0 +pygments==2.19.2 + # via + # pytest + # sphinx +pyjwt[crypto]==2.10.1 # via globus-sdk -pylint==3.3.0 - # via matminer (setup.py) -pymatgen==2024.9.17.1 - # via matminer (setup.py) -pymongo==4.9.1 - # via matminer (setup.py) -pyparsing==3.1.4 +pylint==4.0.1 # via + # matminer + # matminer (pyproject.toml) +pymatgen==2025.10.7 + # via + # matminer + # matminer (pyproject.toml) +pymongo==4.15.3 + # via + # matminer + # matminer (pyproject.toml) +pyparsing==3.2.5 + # via + # bibtexparser # httplib2 # matplotlib pypif==2.1.2 # via citrination-client -pytest==8.3.3 +pytest==8.4.2 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pytest-cov # pytest-timeout -pytest-cov==5.0.0 - # via matminer (setup.py) -pytest-timeout==2.3.1 - # via matminer (setup.py) +pytest-cov==7.0.0 + # via + # matminer + # matminer (pyproject.toml) +pytest-timeout==2.4.0 + # via + # matminer + # matminer (pyproject.toml) python-dateutil==2.9.0.post0 # via # matplotlib # pandas -pytz==2024.2 +pytokens==0.2.0 + # via black +pytz==2025.2 # via pandas -pyyaml==6.0.2 - # via - # citrination-client - # pybtex -referencing==0.35.1 +pyyaml==6.0.3 + # via citrination-client +referencing==0.37.0 # via # jsonschema # jsonschema-specifications -requests==2.32.3 +requests==2.32.5 # via # citrination-client # coveralls # globus-sdk - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-forge # mdf-toolbox # pymatgen # sphinx -rpds-py==0.20.0 +rpds-py==0.27.1 # via # jsonschema # referencing -ruamel-yaml==0.18.6 - # via pymatgen -ruamel-yaml-clib==0.2.8 +ruamel-yaml==0.18.15 + # via + # monty + # pymatgen +ruamel-yaml-clib==0.2.14 # via ruamel-yaml -scikit-learn==1.5.2 +scikit-learn==1.7.2 # via # dscribe - # matminer (setup.py) -scipy==1.14.1 + # matminer + # matminer (pyproject.toml) +scipy==1.15.3 # via # ase # dscribe # pymatgen # scikit-learn - # sparse -six==1.16.0 +six==1.17.0 # via # aflow # citrination-client - # pybtex # pypif # python-dateutil -snowballstemmer==2.2.0 +snowballstemmer==3.0.1 # via sphinx -soupsieve==2.6 +soupsieve==2.8 # via beautifulsoup4 -sparse==0.15.4 +sparse==0.17.0 # via dscribe -spglib==2.5.0 +spglib==2.6.0 # via pymatgen -sphinx==8.0.2 - # via matminer (setup.py) +sphinx==8.1.3 + # via + # matminer + # matminer (pyproject.toml) sphinxcontrib-applehelp==2.0.0 # via sphinx sphinxcontrib-devhelp==2.0.0 @@ -278,41 +325,49 @@ sphinxcontrib-qthelp==2.0.0 # via sphinx sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sympy==1.13.3 +sympy==1.14.0 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen tabulate==0.9.0 # via pymatgen -tenacity==9.0.0 - # via plotly -termcolor==2.4.0 +termcolor==3.1.0 # via aflow -threadpoolctl==3.5.0 +threadpoolctl==3.6.0 # via scikit-learn -tomli==2.0.1 +tomli==2.3.0 # via # black # coverage # pylint # pytest # sphinx -tomlkit==0.13.2 +tomlkit==0.13.3 # via pylint -tqdm==4.66.5 +tqdm==4.67.1 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-forge # pymatgen -typing-extensions==4.12.2 +typing-extensions==4.15.0 # via # astroid + # beautifulsoup4 # black -tzdata==2024.1 + # cryptography + # exceptiongroup + # globus-sdk + # referencing + # spglib +tzdata==2025.2 # via pandas -ujson==5.10.0 - # via matminer (setup.py) -uncertainties==3.2.2 +ujson==5.11.0 + # via + # matminer + # matminer (pyproject.toml) +uncertainties==3.2.3 # via pymatgen -urllib3==2.2.3 +urllib3==2.5.0 # via requests diff --git a/requirements/ubuntu-latest_py3.11.txt b/requirements/ubuntu-latest_py3.11.txt index bfd3b6aa6..7fd44689b 100644 --- a/requirements/ubuntu-latest_py3.11.txt +++ b/requirements/ubuntu-latest_py3.11.txt @@ -5,108 +5,127 @@ # pip-compile --all-extras --output-file=requirements/ubuntu-latest_py3.11.txt # aflow==0.0.11 - # via matminer (setup.py) + # via + # matminer + # matminer (pyproject.toml) alabaster==1.0.0 # via sphinx -ase==3.23.0 +ase==3.26.0 # via # aflow # dscribe - # matminer (setup.py) -astroid==3.3.3 + # matminer + # matminer (pyproject.toml) +astroid==4.0.1 # via pylint -attrs==24.2.0 +attrs==25.4.0 # via # jsonschema # referencing -babel==2.16.0 +babel==2.17.0 # via sphinx -beautifulsoup4==4.12.3 +beautifulsoup4==4.14.2 # via aflow -black==24.8.0 - # via matminer (setup.py) -certifi==2024.8.30 +bibtexparser==1.4.3 + # via pymatgen +black==25.9.0 + # via + # matminer + # matminer (pyproject.toml) +certifi==2025.10.5 # via requests -cffi==1.17.1 +cffi==2.0.0 # via cryptography -charset-normalizer==3.3.2 +charset-normalizer==3.4.4 # via requests citrination-client==6.5.1 - # via matminer (setup.py) -click==8.1.7 + # via + # matminer + # matminer (pyproject.toml) +click==8.3.0 # via black -contourpy==1.3.0 +contourpy==1.3.3 # via matplotlib -coverage[toml]==7.6.1 +coverage[toml]==7.11.0 # via # coveralls - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pytest-cov coveralls==4.0.1 - # via matminer (setup.py) -cryptography==43.0.1 + # via + # matminer + # matminer (pyproject.toml) +cryptography==46.0.3 # via # globus-sdk # pyjwt cycler==0.12.1 # via matplotlib -dill==0.3.8 +dill==0.4.0 # via pylint -dnspython==2.6.1 +dnspython==2.8.0 # via pymongo docopt==0.6.2 # via coveralls docutils==0.21.2 # via sphinx -dscribe==2.1.1 - # via matminer (setup.py) +dscribe==2.1.2 + # via matminer (pyproject.toml) fair-research-login==0.3.1 # via mdf-toolbox -flake8==7.1.1 - # via matminer (setup.py) -fonttools==4.53.1 +flake8==7.3.0 + # via + # matminer + # matminer (pyproject.toml) +fonttools==4.60.1 # via matplotlib -globus-sdk==3.45.0 +globus-sdk==3.65.0 # via # fair-research-login # mdf-forge # mdf-toolbox -httplib2==0.22.0 - # via matminer (setup.py) -idna==3.10 +httplib2==0.31.0 + # via + # matminer + # matminer (pyproject.toml) +idna==3.11 # via requests imagesize==1.4.1 # via sphinx -iniconfig==2.0.0 +iniconfig==2.3.0 # via pytest -isort==5.13.2 +isort==7.0.0 # via pylint -jinja2==3.1.4 +jinja2==3.1.6 # via # aflow # sphinx jmespath==1.0.1 - # via matminer (setup.py) -joblib==1.4.2 + # via + # matminer + # matminer (pyproject.toml) +joblib==1.5.2 # via # dscribe # pymatgen # scikit-learn -jsonschema==4.23.0 +jsonschema==4.25.1 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-toolbox -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2025.9.1 # via jsonschema -kiwisolver==1.4.7 +kiwisolver==1.4.9 # via matplotlib -latexcodec==3.0.0 - # via pybtex -llvmlite==0.43.0 +llvmlite==0.45.1 # via numba -markupsafe==2.1.5 +markupsafe==3.0.3 # via jinja2 -matplotlib==3.9.2 +matminer[aflow,citrine,describe,dev,mdfforge,mpds] @ file:///home/runner/work/matminer/matminer + # via matminer (pyproject.toml) +matplotlib==3.10.7 # via # ase # pymatgen @@ -115,29 +134,36 @@ mccabe==0.7.0 # flake8 # pylint mdf-forge==0.8.0 - # via matminer (setup.py) + # via + # matminer + # matminer (pyproject.toml) mdf-toolbox==0.7.1 # via mdf-forge -monty==2024.7.30 +monty==2025.3.3 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen mpmath==1.3.0 # via sympy -mypy-extensions==1.0.0 +mypy-extensions==1.1.0 # via black -networkx==3.3 +narwhals==2.8.0 + # via plotly +networkx==3.5 # via pymatgen -numba==0.60.0 +numba==0.62.1 # via sparse -numpy==1.26.4 +numpy==2.3.4 # via # aflow # ase # contourpy # dscribe - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # matplotlib + # monty # numba # pandas # pymatgen @@ -146,7 +172,9 @@ numpy==1.26.4 # scipy # sparse # spglib -packaging==24.1 +orjson==3.11.3 + # via pymatgen +packaging==25.0 # via # black # matplotlib @@ -155,115 +183,136 @@ packaging==24.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.2.3 +pandas==2.3.3 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen pathspec==0.12.1 # via black -pillow==10.4.0 +pillow==12.0.0 # via matplotlib -platformdirs==4.3.6 +platformdirs==4.5.0 # via # black # pylint -plotly==5.24.1 - # via pymatgen -pluggy==1.5.0 - # via pytest -pybtex==0.24.0 +plotly==6.3.1 # via pymatgen -pycodestyle==2.12.1 +pluggy==1.6.0 + # via + # pytest + # pytest-cov +pycodestyle==2.14.0 # via flake8 -pycparser==2.22 +pycparser==2.23 # via cffi -pyflakes==3.2.0 +pyflakes==3.4.0 # via flake8 -pygments==2.18.0 - # via sphinx -pyjwt[crypto]==2.9.0 +pygments==2.19.2 + # via + # pytest + # sphinx +pyjwt[crypto]==2.10.1 # via globus-sdk -pylint==3.3.0 - # via matminer (setup.py) -pymatgen==2024.9.17.1 - # via matminer (setup.py) -pymongo==4.9.1 - # via matminer (setup.py) -pyparsing==3.1.4 +pylint==4.0.1 # via + # matminer + # matminer (pyproject.toml) +pymatgen==2025.10.7 + # via + # matminer + # matminer (pyproject.toml) +pymongo==4.15.3 + # via + # matminer + # matminer (pyproject.toml) +pyparsing==3.2.5 + # via + # bibtexparser # httplib2 # matplotlib pypif==2.1.2 # via citrination-client -pytest==8.3.3 +pytest==8.4.2 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pytest-cov # pytest-timeout -pytest-cov==5.0.0 - # via matminer (setup.py) -pytest-timeout==2.3.1 - # via matminer (setup.py) +pytest-cov==7.0.0 + # via + # matminer + # matminer (pyproject.toml) +pytest-timeout==2.4.0 + # via + # matminer + # matminer (pyproject.toml) python-dateutil==2.9.0.post0 # via # matplotlib # pandas -pytz==2024.2 +pytokens==0.2.0 + # via black +pytz==2025.2 # via pandas -pyyaml==6.0.2 - # via - # citrination-client - # pybtex -referencing==0.35.1 +pyyaml==6.0.3 + # via citrination-client +referencing==0.37.0 # via # jsonschema # jsonschema-specifications -requests==2.32.3 +requests==2.32.5 # via # citrination-client # coveralls # globus-sdk - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-forge # mdf-toolbox # pymatgen # sphinx -rpds-py==0.20.0 +roman-numerals-py==3.1.0 + # via sphinx +rpds-py==0.27.1 # via # jsonschema # referencing -ruamel-yaml==0.18.6 - # via pymatgen -ruamel-yaml-clib==0.2.8 +ruamel-yaml==0.18.15 + # via + # monty + # pymatgen +ruamel-yaml-clib==0.2.14 # via ruamel-yaml -scikit-learn==1.5.2 +scikit-learn==1.7.2 # via # dscribe - # matminer (setup.py) -scipy==1.14.1 + # matminer + # matminer (pyproject.toml) +scipy==1.16.2 # via # ase # dscribe # pymatgen # scikit-learn - # sparse -six==1.16.0 +six==1.17.0 # via # aflow # citrination-client - # pybtex # pypif # python-dateutil -snowballstemmer==2.2.0 +snowballstemmer==3.0.1 # via sphinx -soupsieve==2.6 +soupsieve==2.8 # via beautifulsoup4 -sparse==0.15.4 +sparse==0.17.0 # via dscribe -spglib==2.5.0 +spglib==2.6.0 # via pymatgen -sphinx==8.0.2 - # via matminer (setup.py) +sphinx==8.2.3 + # via + # matminer + # matminer (pyproject.toml) sphinxcontrib-applehelp==2.0.0 # via sphinx sphinxcontrib-devhelp==2.0.0 @@ -276,30 +325,37 @@ sphinxcontrib-qthelp==2.0.0 # via sphinx sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sympy==1.13.3 +sympy==1.14.0 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen tabulate==0.9.0 # via pymatgen -tenacity==9.0.0 - # via plotly -termcolor==2.4.0 +termcolor==3.1.0 # via aflow -threadpoolctl==3.5.0 +threadpoolctl==3.6.0 # via scikit-learn -tomlkit==0.13.2 +tomlkit==0.13.3 # via pylint -tqdm==4.66.5 +tqdm==4.67.1 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-forge # pymatgen -tzdata==2024.1 +typing-extensions==4.15.0 + # via + # beautifulsoup4 + # referencing + # spglib +tzdata==2025.2 # via pandas -ujson==5.10.0 - # via matminer (setup.py) -uncertainties==3.2.2 +ujson==5.11.0 + # via + # matminer + # matminer (pyproject.toml) +uncertainties==3.2.3 # via pymatgen -urllib3==2.2.3 +urllib3==2.5.0 # via requests diff --git a/requirements/ubuntu-latest_py3.9.txt b/requirements/ubuntu-latest_py3.9.txt index 2d58a73c4..35ff7c834 100644 --- a/requirements/ubuntu-latest_py3.9.txt +++ b/requirements/ubuntu-latest_py3.9.txt @@ -5,116 +5,138 @@ # pip-compile --all-extras --output-file=requirements/ubuntu-latest_py3.9.txt # aflow==0.0.11 - # via matminer (setup.py) + # via + # matminer + # matminer (pyproject.toml) alabaster==0.7.16 # via sphinx -ase==3.23.0 +ase==3.26.0 # via # aflow # dscribe - # matminer (setup.py) -astroid==3.3.3 + # matminer + # matminer (pyproject.toml) +astroid==3.3.11 # via pylint -attrs==24.2.0 +attrs==25.4.0 # via # jsonschema # referencing -babel==2.16.0 +babel==2.17.0 # via sphinx -beautifulsoup4==4.12.3 +beautifulsoup4==4.14.2 # via aflow -black==24.8.0 - # via matminer (setup.py) -certifi==2024.8.30 +black==25.9.0 + # via + # matminer + # matminer (pyproject.toml) +certifi==2025.10.5 # via requests -cffi==1.17.1 +cffi==2.0.0 # via cryptography -charset-normalizer==3.3.2 +charset-normalizer==3.4.4 # via requests citrination-client==6.5.1 - # via matminer (setup.py) -click==8.1.7 + # via + # matminer + # matminer (pyproject.toml) +click==8.1.8 # via black contourpy==1.3.0 # via matplotlib -coverage[toml]==7.6.1 +coverage[toml]==7.10.7 # via # coveralls - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pytest-cov coveralls==4.0.1 - # via matminer (setup.py) -cryptography==43.0.1 + # via + # matminer + # matminer (pyproject.toml) +cryptography==46.0.3 # via # globus-sdk # pyjwt cycler==0.12.1 # via matplotlib -dill==0.3.8 +dill==0.4.0 # via pylint -dnspython==2.6.1 +dnspython==2.7.0 # via pymongo docopt==0.6.2 # via coveralls docutils==0.21.2 # via sphinx -dscribe==2.1.1 - # via matminer (setup.py) -exceptiongroup==1.2.2 +dscribe==2.1.2 + # via matminer (pyproject.toml) +exceptiongroup==1.3.0 # via pytest fair-research-login==0.3.1 # via mdf-toolbox -flake8==7.1.1 - # via matminer (setup.py) -fonttools==4.53.1 +flake8==7.3.0 + # via + # matminer + # matminer (pyproject.toml) +fonttools==4.60.1 # via matplotlib -globus-sdk==3.45.0 +globus-sdk==3.65.0 # via # fair-research-login # mdf-forge # mdf-toolbox -httplib2==0.22.0 - # via matminer (setup.py) -idna==3.10 +httplib2==0.31.0 + # via + # matminer + # matminer (pyproject.toml) +idna==3.11 # via requests imagesize==1.4.1 # via sphinx -importlib-metadata==8.5.0 - # via sphinx -importlib-resources==6.4.5 +importlib-metadata==8.7.0 + # via + # isort + # pybtex + # sphinx +importlib-resources==6.5.2 # via # matplotlib # spglib -iniconfig==2.0.0 +iniconfig==2.1.0 # via pytest -isort==5.13.2 +isort==6.1.0 # via pylint -jinja2==3.1.4 +jinja2==3.1.6 # via # aflow # sphinx jmespath==1.0.1 - # via matminer (setup.py) -joblib==1.4.2 + # via + # matminer + # matminer (pyproject.toml) +joblib==1.5.2 # via # dscribe # pymatgen # scikit-learn -jsonschema==4.23.0 +jsonschema==4.25.1 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-toolbox -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2025.9.1 # via jsonschema kiwisolver==1.4.7 # via matplotlib -latexcodec==3.0.0 +latexcodec==3.0.1 # via pybtex llvmlite==0.43.0 # via numba -markupsafe==2.1.5 +markupsafe==3.0.3 # via jinja2 -matplotlib==3.9.2 +matminer[aflow,citrine,describe,dev,mdfforge,mpds] @ file:///home/runner/work/matminer/matminer + # via matminer (pyproject.toml) +matplotlib==3.9.4 # via # ase # pymatgen @@ -123,29 +145,36 @@ mccabe==0.7.0 # flake8 # pylint mdf-forge==0.8.0 - # via matminer (setup.py) + # via + # matminer + # matminer (pyproject.toml) mdf-toolbox==0.7.1 # via mdf-forge -monty==2024.7.30 +monty==2025.3.3 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen mpmath==1.3.0 # via sympy -mypy-extensions==1.0.0 +mypy-extensions==1.1.0 # via black +narwhals==2.8.0 + # via plotly networkx==3.2.1 # via pymatgen numba==0.60.0 # via sparse -numpy==1.26.4 +numpy==2.0.2 # via # aflow # ase # contourpy # dscribe - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # matplotlib + # monty # numba # pandas # pymatgen @@ -154,7 +183,7 @@ numpy==1.26.4 # scipy # sparse # spglib -packaging==24.1 +packaging==25.0 # via # black # matplotlib @@ -163,91 +192,113 @@ packaging==24.1 # sphinx palettable==3.3.3 # via pymatgen -pandas==2.2.3 +pandas==2.3.3 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen pathspec==0.12.1 # via black -pillow==10.4.0 +pillow==11.3.0 # via matplotlib -platformdirs==4.3.6 +platformdirs==4.4.0 # via # black # pylint -plotly==5.24.1 +plotly==6.3.1 # via pymatgen -pluggy==1.5.0 - # via pytest -pybtex==0.24.0 +pluggy==1.6.0 + # via + # pytest + # pytest-cov +pybtex==0.25.1 # via pymatgen -pycodestyle==2.12.1 +pycodestyle==2.14.0 # via flake8 -pycparser==2.22 +pycparser==2.23 # via cffi -pyflakes==3.2.0 +pyflakes==3.4.0 # via flake8 -pygments==2.18.0 - # via sphinx -pyjwt[crypto]==2.9.0 +pygments==2.19.2 + # via + # pytest + # sphinx +pyjwt[crypto]==2.10.1 # via globus-sdk -pylint==3.3.0 - # via matminer (setup.py) +pylint==3.3.9 + # via + # matminer + # matminer (pyproject.toml) pymatgen==2024.8.9 - # via matminer (setup.py) -pymongo==4.9.1 - # via matminer (setup.py) -pyparsing==3.1.4 + # via + # matminer + # matminer (pyproject.toml) +pymongo==4.15.3 + # via + # matminer + # matminer (pyproject.toml) +pyparsing==3.2.5 # via # httplib2 # matplotlib pypif==2.1.2 # via citrination-client -pytest==8.3.3 +pytest==8.4.2 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pytest-cov # pytest-timeout -pytest-cov==5.0.0 - # via matminer (setup.py) -pytest-timeout==2.3.1 - # via matminer (setup.py) +pytest-cov==7.0.0 + # via + # matminer + # matminer (pyproject.toml) +pytest-timeout==2.4.0 + # via + # matminer + # matminer (pyproject.toml) python-dateutil==2.9.0.post0 # via # matplotlib # pandas -pytz==2024.2 +pytokens==0.2.0 + # via black +pytz==2025.2 # via pandas -pyyaml==6.0.2 +pyyaml==6.0.3 # via # citrination-client # pybtex -referencing==0.35.1 +referencing==0.36.2 # via # jsonschema # jsonschema-specifications -requests==2.32.3 +requests==2.32.5 # via # citrination-client # coveralls # globus-sdk - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-forge # mdf-toolbox # pymatgen # sphinx -rpds-py==0.20.0 +rpds-py==0.27.1 # via # jsonschema # referencing -ruamel-yaml==0.18.6 - # via pymatgen -ruamel-yaml-clib==0.2.8 +ruamel-yaml==0.18.15 + # via + # monty + # pymatgen +ruamel-yaml-clib==0.2.14 # via ruamel-yaml -scikit-learn==1.5.2 +scikit-learn==1.6.1 # via # dscribe - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) scipy==1.13.1 # via # ase @@ -255,23 +306,24 @@ scipy==1.13.1 # pymatgen # scikit-learn # sparse -six==1.16.0 +six==1.17.0 # via # aflow # citrination-client - # pybtex # pypif # python-dateutil -snowballstemmer==2.2.0 +snowballstemmer==3.0.1 # via sphinx -soupsieve==2.6 +soupsieve==2.8 # via beautifulsoup4 -sparse==0.15.4 +sparse==0.15.5 # via dscribe -spglib==2.5.0 +spglib==2.6.0 # via pymatgen sphinx==7.4.7 - # via matminer (setup.py) + # via + # matminer + # matminer (pyproject.toml) sphinxcontrib-applehelp==2.0.0 # via sphinx sphinxcontrib-devhelp==2.0.0 @@ -284,48 +336,54 @@ sphinxcontrib-qthelp==2.0.0 # via sphinx sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sympy==1.13.3 +sympy==1.14.0 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # pymatgen tabulate==0.9.0 # via pymatgen -tenacity==9.0.0 - # via plotly -termcolor==2.4.0 +termcolor==3.1.0 # via aflow -threadpoolctl==3.5.0 +threadpoolctl==3.6.0 # via scikit-learn -tomli==2.0.1 +tomli==2.3.0 # via # black # coverage # pylint # pytest # sphinx -tomlkit==0.13.2 +tomlkit==0.13.3 # via pylint -tqdm==4.66.5 +tqdm==4.67.1 # via - # matminer (setup.py) + # matminer + # matminer (pyproject.toml) # mdf-forge # pymatgen -typing-extensions==4.12.2 +typing-extensions==4.15.0 # via # astroid + # beautifulsoup4 # black + # cryptography + # exceptiongroup # globus-sdk # pylint + # referencing # spglib -tzdata==2024.1 +tzdata==2025.2 # via pandas -ujson==5.10.0 - # via matminer (setup.py) -uncertainties==3.2.2 +ujson==5.11.0 + # via + # matminer + # matminer (pyproject.toml) +uncertainties==3.2.3 # via pymatgen -urllib3==2.2.3 +urllib3==2.5.0 # via requests -zipp==3.20.2 +zipp==3.23.0 # via # importlib-metadata # importlib-resources